| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,631:1 | +G | 6.2% | coding (73/522 nt) | hscB → | DnaJ‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,631 | 1 | . | G | 6.2% | 327.3 / 15.4 | 81 | coding (73/522 nt) | hscB | DnaJ‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base . (41/35); new base G (2/3); total (43/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
TTCAACAACCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACC > NC_002947/980494‑980778 | ttCAACAACCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATcgc < 1:139389/149‑1 (MQ=255) aacaacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAg < 5:8709/149‑1 (MQ=255) aacCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg < 4:218306/149‑1 (MQ=255) acCCGAACGTGCGCTGTGTGTGTGGCTGCTGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTATGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTgg < 7:75735/149‑1 (MQ=255) ccccAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGc > 6:309144/1‑149 (MQ=255) cccAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGcc > 2:253855/1‑149 (MQ=255) cccAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCGGGCCAGCTCGCGATAGCGAgtggc > 8:159984/1‑144 (MQ=255) cAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg < 1:60207/144‑1 (MQ=255) cAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTg > 2:60207/1‑144 (MQ=255) atcGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCAGCTCGCGATAGCGAG‑TGGCCagc < 8:261597/147‑1 (MQ=255) aaCGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCcgc > 4:92528/1‑149 (MQ=255) aaCGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCcgc < 8:28522/149‑1 (MQ=255) aCGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCcgcg < 4:153485/149‑1 (MQ=255) tGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCAGCTCGCGATAGCGAG‑TGGCCagcttgt < 3:105734/149‑5 (MQ=255) cgGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCa < 3:92528/149‑1 (MQ=255) gAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTgg > 7:25992/1‑132 (MQ=255) gAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTgg < 8:25992/132‑1 (MQ=255) cTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCtt > 5:160568/1‑149 (MQ=255) ggcgAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGc‑‑c < 6:17684/149‑1 (MQ=255) gAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCAGCTCGCGATAGCGAG‑TGGCCagcttg < 8:196119/125‑4 (MQ=38) gAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCAGCTCGCGATAGCGAG‑TGGCCagcttg > 7:196119/1‑122 (MQ=38) gAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGAc > 8:194130/1‑149 (MQ=255) tCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTcc > 2:114303/1‑148 (MQ=255) aaCGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGa < 5:309144/148‑1 (MQ=255) aCGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTgg < 3:295680/107‑1 (MQ=255) aCGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTgg > 4:295680/1‑107 (MQ=255) gTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGt < 6:288146/149‑1 (MQ=255) tttGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTTGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGt > 2:250747/1‑148 (MQ=255) tttGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGt > 2:85743/1‑148 (MQ=255) tGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGa < 7:194130/148‑1 (MQ=255) gctgTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTa < 3:128731/148‑1 (MQ=255) ctgTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTAtt < 6:160568/149‑1 (MQ=255) tACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGTTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTg > 1:99459/1‑148 (MQ=255) tACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTgg < 3:258766/149‑1 (MQ=255) tCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt < 6:155940/144‑1 (MQ=255) tCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt > 5:155940/1‑144 (MQ=255) ccTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaa > 1:10739/1‑148 (MQ=255) cTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGaaaa > 7:109224/1‑148 (MQ=255) tCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCcg > 1:15501/1‑149 (MQ=255) cATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGAc > 6:265719/1‑108 (MQ=255) cATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGAc < 5:265719/108‑1 (MQ=255) ttACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCgg > 5:102851/1‑149 (MQ=255) aCGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGcc > 6:196302/1‑149 (MQ=255) gCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt < 7:63945/131‑1 (MQ=255) gCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCt > 8:63945/1‑131 (MQ=255) tttGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAacga > 3:141949/1‑149 (MQ=255) tttGACCTCCAGACAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAacga > 8:131582/1‑149 (MQ=255) aCCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGa < 6:86251/100‑1 (MQ=255) aCCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGa > 5:86251/1‑100 (MQ=255) aCCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGc < 4:141949/148‑1 (MQ=255) ccTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCtt < 1:114303/149‑1 (MQ=255) ccTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCt > 3:6365/1‑148 (MQ=255) tCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCACCGACGCTTAc > 8:286700/1‑149 (MQ=255) tCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 4:175940/1‑149 (MQ=255) tCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCCAAGACCATCCTGATCGCAAACC‑‑CGACGCCTCCCAGCGTGAGCAGCGAATTGCGCTCGAAAAATCCGCGGCCCTAAACCACGCATAc > 5:212927/1‑149 (MQ=255) tCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTAGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 1:270167/1‑149 (MQ=255) cAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc < 5:196302/147‑1 (MQ=255) gCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 3:242690/1‑145 (MQ=255) gCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc < 8:220873/145‑1 (MQ=255) gCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 7:220873/1‑145 (MQ=255) gCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc < 4:242690/145‑1 (MQ=255) gCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGa > 4:267163/1‑149 (MQ=255) cAAGATTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCAGCGAAGTCCATCCTGATCGCTTTGA‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACg > 5:223505/1‑149 (MQ=255) aGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCt < 4:102652/149‑1 (MQ=255) cTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTTGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTgc < 1:250747/149‑1 (MQ=255) cTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTgc > 5:215392/1‑149 (MQ=255) ttCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc > 7:13616/1‑138 (MQ=255) ttCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTAc < 8:13616/138‑1 (MQ=255) tCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTgcg > 4:237656/1‑148 (MQ=255) cGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt > 7:153581/1‑69 (MQ=255) cGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCttt < 8:153581/69‑1 (MQ=255) gTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGt < 1:85743/149‑1 (MQ=255) gATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGcgcc > 7:292716/1‑149 (MQ=255) tcGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGCGGGGCCGCCTCCGCGCGTGCGCAGCGTTTTGCGGTGGAAAAAACCGCGGCCCTCACCGCCGGTTACCACACGGTGCGCAGTGcgccgc > 1:93263/1‑149 (MQ=255) gACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcg > 5:9303/1‑149 (MQ=255) gCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgcgcgc < 3:175940/149‑1 (MQ=255) gCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgcgcgc < 2:168029/149‑1 (MQ=255) cTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTcgcgcgcg < 4:6365/149‑1 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTgc < 6:85999/122‑1 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTgc > 5:85999/1‑122 (MQ=255) cA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTAcc > 6:154782/1‑149 (MQ=255) | TTCAACAACCCCAACGTGCGCGGTGAGTGTGGCTGCGGCGAAAGCTTCAACGTTTGAGGCTGGCTGTGGGTACTCCTTGTCATTACGCATTGTTTGACCTCCAGCCAAGCTTCCGTCTGGATCTCGACAAGCTGGCCA‑CTCGCTATCGCGAGCTGGCCCGCGAAGTCCATCCTGATCGCTTTGC‑‑CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACC > NC_002947/980494‑980778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |