New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 174906 | NA (NA) | 4 (0.080) | 4/256 | NT | NA | noncoding (1704/2902 nt) | PP_23SA | 23S ribosomal RNA |
? | NC_002947 | = 174936 | NA (NA) | noncoding (1734/2902 nt) | PP_23SA | 23S ribosomal RNA |
CTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/174755‑174906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < NC_002947/174936‑174789 CTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGC < 7:79397/148‑1 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCG > 8:87701/1‑149 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCG > 7:289901/1‑149 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCG > 6:237407/1‑149 CCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 1:270684/1‑149 CCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CACCAAAACGACTCAGGGGGTTAGGTTGAGAATACCAAGGAGATTGAGAGAAGTCGGGTGAAGGAACTTGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCG > 4:9108/1‑147 CCAAGAAAAGCTCCAAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTCAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 2:234749/1‑149 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCAT > 5:265255/1‑149 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 3:79735/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 7:35044/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 4:302694/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 5:173457/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 6:161428/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGGA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGCGAGAAGGTGCGCCGGC > 8:303671/1‑147 CTCCTAAGCTTCAGATAACTGGGAACCGTACCCCCAAACCGACACAGGTGGTTAGTTAGAGAATACCAAGGCGGTTGAGAGAACTCGGGTGAAGGAACTTGCCAAAATGGCACGTTAAGTTCGGGTGAAGGTGCGCCGGCcagg > 1:194502/1‑140 TCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCC > 7:136705/1‑126 TCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCC < 8:136705/126‑1 GGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCT < 6:281645/147‑1 TA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGC < 6:265255/149‑1 AAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGG > 6:40403/1‑140 AAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGG < 5:40403/140‑1 CCGGCATGGGCTTACGGAGCAAGTCCTTCCCCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGG > 5:53826/1‑149 CGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTGCGGT > 7:49992/1‑149 CGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGT < 1:167246/149‑1 CGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGT > 4:300119/1‑149 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTC > 5:161428/1‑149 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTC < 6:325231/149‑1 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTC > 3:98946/1‑149 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGT < 4:172000/131‑1 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC < 2:231877/118‑1 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC > 1:231877/1‑118 CATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < 1:83939/149‑1 CATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < 6:266736/149‑1 CATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < 5:121555/149‑1 CATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT < 2:168341/114‑1 CATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT > 1:168341/1‑114 CATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACATTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACATGTGTCGGATTGGGGTACGGTTC > 7:86094/1‑148 CTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTA‑CCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/174755‑174906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < NC_002947/174936‑174789 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |