New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 201085	67 (1.290)	8 (0.160)	6/258	NT	10.8%	coding (6591/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 201110	67 (1.330)					coding (6616/26049 nt)	PP_0168	putative surface adhesion protein

AGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/200961‑201085 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTGTTGATCGGCAGACCATCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTGACTGAAGGGGTCGCGGTCAGCTTCGCCACC  <  NC_002947/201110‑200965                                                                                                                                                                                                                                                                                  AGGTGGTGGCGAAACTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGAC‑CGACGACAGTGGTGCCGTCG‑GT                                                                                                                           <  6:211771/149‑1                          CCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTA                                                                                                               >  5:211499/1‑137                          CCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTA                                                                                                               >  5:216199/1‑137                          CCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTA                                                                                                               <  6:211499/137‑1                          CCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTA                                                                                                               <  6:216199/137‑1                                       GAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGC                                                                                                                       >  5:122375/1‑116                                       GAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGC                                                                                                                       <  6:122375/116‑1                                                                                                 ACAACCACTCGGAGCTGTACTTCAAGCTGAC‑CGACGGCACCACTGTCGTCGTGGCAGCTTGAAGTACAGCTCCGAGTGGTTGTTGATCGGCAGACCATCTTTGGTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTGACT                             >  7:168779/1‑148                                                                                                                          GCTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTGTTGATCGGCAGACCATCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTGACTGAAGGGGTCGCGGTCAGCTTCGCCA    <  5:129250/148‑1                                                                                                                           CTGCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTGTTGATCGGCAGACCATCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTGACTGAAGGGGTCGCGGTCAGCTTCGCCACC  <  6:232537/149‑1                                                                                                                                                                                                                                                                                  AGGTGGTGGCGAAGCTGACCGCGACCCCTTCAGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGATGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/200961‑201085 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgCCACGACGACAGTGGTGCCGTCG‑GTCAGCTTGAAGTACAGCTCCGAGTGGTTGTTGATCGGCAGACCATCTTTGTTGGTCAGGGTGATGGTGTAGGTGATCTCACCGCCTTCGGTGACTGAAGGGGTCGCGGTCAGCTTCGCCACC  <  NC_002947/201110‑200965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.