New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	736141 =	58 (1.110)	3 (0.060)	3/256	NT	5.4%	coding (196/630 nt)	PP_0628	hypothetical protein
	?	NC_002947	736183 =	50 (1.000)					coding (154/630 nt)	PP_0628	hypothetical protein

AAGCCAATGCCTTTCTCTCCAACGCCCGTAAGTGGGAGCGGGAGCGTTGGGTGTGCCAGCGCCTGTTGCAGGGGCTGAACATTCCCTACCGCAGCGAGGACTTCACCCCGGCGGGGCAGGAGCCACCTGACGTGCTGTTCCGCGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/736290‑736141 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGAGAGAAAGGCATTGGCTTGTTCGGCCTGGATGGTAAGCAGGCGCAGGTAGTCTGAGT  >  NC_002947/736183‑736329                                                                                                                                                                                                                                                                                                           AAGCCAATGCCTTTCTCTCCAACGCCCGTAAGTGGGAGCGGGAGCGTTGGGTGTGCCAGCGCCTGTTGCAGGGGCTGAACATTCCCTACCGCAGCGAGGACTTCACCCCGGCGGGGCAGGAGCCACCTGACGTGCTGTTCCGCGACGCC                                                                                                                                                      >  5:252287/1‑149  AGCCAATGCCTTTCTCTCCAACGCCCGTAAGTGGGAGCGGGAGCGTTGGGTGTGCCAGCGCCTGTTGCAGGGGCTGAACATTCCCTACCGCAGCGAGGACTTCACCCCGGCGGGGCAGGAGCCACCTGACGTGCTGTTCCGCGACGCCG                                                                                                                                                     <  7:120590/149‑1                                                                                                          CCCCGGCGGGGCAGGAGCCACCTGACGTGCTGTTCCGCGACGCCGGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGAGAGAAAGGCATTG                                             >  8:9235/1‑149                                                                                                           CCCGGCGGGGCAGGAGCCACCTGACGTGCTGTTCCGCGACGCCGGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGA                                                          <  1:233858/135‑1                                                                                                           CCCGGCGGGGCAGGAGCCACCTGACGTGCTGTTCCGCGACGCCGGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGA                                                          >  2:233858/1‑135                                                                                                                                                   GCCGGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGAGAGAAAGGCATTGGCTTGTTCGGCCTGGATGGTAAGCAGGCGCAGGTAGTCTGA    <  1:175383/149‑1                                                                                                                                                   GCCGGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGAGAGAAAGGCATTGGCTTGTTCGGCCTGGATGGTAAGCAGGCGCAGGTAGTCTGA    <  8:120590/149‑1                                                                                                                                                     CGGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGAGAGAAAGGCATTGGCTTGTTCGGCCTGGATGGTAAGCAGGCGCAGGTAGTCTGAGT  <  7:140169/149‑1                                                                                                                                                                                                                                                                                                           AAGCCAATGCCTTTCTCTCCAACGCCCGTAAGTGGGAGCGGGAGCGTTGGGTGTGCCAGCGCCTGTTGCAGGGGCTGAACATTCCCTACCGCAGCGAGGACTTCACCCCGGCGGGGCAGGAGCCACCTGACGTGCTGTTCCGCGACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/736290‑736141 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgGGGTGAAGTCCTCGCTGCGGTAGGGAATGTTCAGCCCCTGCAACAGGCGCTGGCACACCCAACGCTCCCGCTCCCACTTACGGGCGTTGGAGAGAAAGGCATTGGCTTGTTCGGCCTGGATGGTAAGCAGGCGCAGGTAGTCTGAGT  >  NC_002947/736183‑736329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.