| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 746418 | NA (NA) | 4 (0.080) | 3/256 | NT | NA | coding (81/1533 nt) | PP_0637 | transposase |
| ? | NC_002947 | = 746464 | NA (NA) | coding (35/1533 nt) | PP_0637 | transposase | |||||
TCAGCGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/746266‑746418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCC < NC_002947/746464‑746317 TCAGCGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTC > 1:315276/1‑149TCAGCGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTC < 2:287790/149‑1TCAGCGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTC > 6:306630/1‑149TCAGCGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGCGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTC < 7:304819/149‑1 AGCGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGA < 1:316000/149‑1 CGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGATTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACC < 5:221637/149‑1 CCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTC > 6:229964/1‑135 CCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTC < 5:229964/135‑1 CAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTT > 1:238032/1‑149 GGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCGT‑‑‑GCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGT < 5:14756/149‑1 GTGTTGGACTCGACGGCTTGCTCGGACTTGCGATTCAATAAGCGGTCACGCAGCAGCTTGACCTGTGCTTTAAGATCGACGATCTGACGTTTGTCGACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTC < 5:163203/149‑1 GACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTC < 2:238032/148‑1 tgcCGACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAACGTCAGATCGTCGACCTTAAAGAACAGGT > 4:249680/4‑93 GACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACTGTCGAGTCCAACAC > 4:5127/1‑149 GACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACAC > 6:282484/1‑149 GACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCG > 4:9183/1‑139 GACCCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCG < 3:9183/139‑1 CCCTGCCGCGCTCAAACTCCTCCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAGGGTCAGATCGTCGACCTTAAAGAACAGTTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGC < 8:212160/149‑1 CCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCC > 1:207045/1‑149 CCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAG < 4:62351/126‑1 CCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAG > 3:62351/1‑126 TCAGCGGTAGGTACCCACTGACTTTCGGGTTCATTGAACAACGCCAGTTGGGGCGTGTTGGACTCGACGGTTTGCTCGGACTTGCGATTGAATAATCGGTCACGCAGCAGCTTGACCTGTTCTTTAAGGTCGACGATCTGACCTTTGTCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/746266‑746418‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccCTGCCGCGCTCAAACTACTGCTTGCGCAGTTGTTGGCCGAGCGCACGGTCGACAAAGGTCAGATCGTCGACCTTAAAGAACAGGTCAAGCTGCTGCGTGACCGATTATTCAATCGCAAGTCCGAGCAAACCGTCGAGTCCAACACGCC < NC_002947/746464‑746317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |