New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 117278959 (1.130)4 (0.080) 3/252 NT 6.5% coding (264/1380 nt) xseA exodeoxyribonuclease 7 large subunit
?NC_002947 = 1172829 60 (1.220)coding (224/1380 nt) xseA exodeoxyribonuclease 7 large subunit

TTCTTTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1172637‑1172789
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCC  <  NC_002947/1172829‑1172686
                                                                                                                                                                                                                                                                                                         
TTCTTTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGC                                                                                                                                                       >  4:192063/1‑148
  CTTTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGC                                                                                                                                                       <  3:192063/146‑1
   TTTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACG                                                                                                                                                   >  5:41074/1‑149
                                                 GGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTG                                                                                                     >  6:264099/1‑149
                                                     CTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCGCTGCGCGATGGCCTGGCGGTGCGGGTGCGTGGCAA                                                                                                 <  2:294626/149‑1
                                                     CTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAA                                                                                                 <  2:206075/149‑1
                                                            GCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCG                                                                                          <  5:264099/149‑1
                                                                                                                                                    CACGCGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGTAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCC  >  7:23657/1‑149
                                                                                                                                                                                                                                                                                                         
TTCTTTCGTTCGGCGCTGAACAGCCCCTCGGCCCCGAGCTTTTCCTTCAGGGCCTCGAAAGCCAGGCGCAGCGCGCCATCACCGGCTGGCTCGACGGTGTCGAGAATAAGCTGGTAGTCGCCACGCCCCTCGAACAGCGAAACCTTGCCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1172637‑1172789
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacgcGGGTACGCCAGGCGCTGCGCGACGGCCTGGCGGTGCGGGTGCGTGGCAAGGTTTCGCTGTTCGAGGGGCGTGGCGACTACCAGCTTATTCTCGACACCGTCGAGCCAGCCGGTGATGGCGCGCTGCGCCTGGCTTTCGAGGCCC  <  NC_002947/1172829‑1172686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.