New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1204553 = | 54 (1.040) | 4 (0.080) | 4/254 | NT | 7.2% | coding (671/762 nt) | PP_1056 | iron‑chelator utilization protein |
? | NC_002947 | 1204591 = | 52 (1.050) | coding (633/762 nt) | PP_1056 | iron‑chelator utilization protein |
GAGCGCCAGCCGCTGCCAAGCAAGGCGCAGGTGGAAGTGATCTGGGCACGTCGCCAAGGGGAAGACTTGTTGGAGCTGGTGCGTAACCTGAGCTTGCCGCAAGGCCAGCTGTATGCCTGGGTGGCGCTGGAAAAAGCCCTGACTCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1204704‑1204553 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcATACAGCTGGCCTTGCGGCAAGCTCAGGTTACGCACCAGCTCCAACAAGTCTTCCCCTTGGCGACGTGCCCAGATCACTTCCACCTGCGCCTTGCTTGGCAGCGGCTGGCGCTCGTGCTCGTCTTCGATCTGGATCACTGC > NC_002947/1204591‑1204731 GAGCGCCAGCCGCTGCCAAGCAAGGCGCAGGTGGAAGTGATCTGGGCACGTCGCCAAGGGGAAGACTTGTTGGAGCTGGTGCGTAACCTGAGCTTGCCGCAAGGCCAGCTGTATGCCTGGGTGGCGCTGGAAAAAGCCCTGACTCGC > 8:217224/1‑147 CTGTATGCCTGGGTGGCGCTGGAAAAAGCCCTGACTCGCCAGGCATACAGCTGGCCTTGCGGCAAGCTCAGGTTACGCACCAGCTCCAACAAGTCTTCCCCTTGGCGACGTGCCCAGATCACTTCCACCTGCGCCTTGCTTG < 7:14650/142‑1 CTGTATGCCTGGGTGGCGCTGGAAAAAGCCCTGACTCGCCAGGCATACAGCTGGCCTTGCGGCAAGCTCAGGTTACGCACCAGCTCCAACAAGTCTTCCCCTTGGCGACGTGCCCAGATCACTTCCACCTGCGCCTTGCTTG > 8:14650/1‑142 TGTATGCCTGGGTGGCGCTGGAAAAAGCCCTGACTCGCCAGGCATACAGCTGGCCTTGCGGCAAGCTCAGGTTACGCACCAGCTCCAACAAGTCTTCCCCTTGGCGACGTGCCCAGATCACTTTCACCTGCGCCTTGCTTGGCAGCGGC > 3:6921/1‑149 CTGGAAAAAGCCCTGACTCGCCAGGCATACAGCTGGCCTTGCGGCAAGCTCAGGTTACGCACCAGCTCCAACAAGTCTTCCCCTTGGCGACGTGCCCAGATCACTTTCACCTGCGCCTTGCTTGGCAGCGGCTGGCGCTCGTGCTCGTC < 4:6921/149‑1 CCAGGCATACAGCTGGCCTTGCGGCAAGCTCAGGTTACGCACCAGCTCCAACAAGTCTTCCCCTTGGCGACGTGCCCAGATCACTTCCACCTGCGCCTTGCTTGGCAGCGGCTGGCGCTCGTGCGCGTCTTCGATCTGGATCACTGC > 8:245951/1‑147 GAGCGCCAGCCGCTGCCAAGCAAGGCGCAGGTGGAAGTGATCTGGGCACGTCGCCAAGGGGAAGACTTGTTGGAGCTGGTGCGTAACCTGAGCTTGCCGCAAGGCCAGCTGTATGCCTGGGTGGCGCTGGAAAAAGCCCTGACTCGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1204704‑1204553 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggcATACAGCTGGCCTTGCGGCAAGCTCAGGTTACGCACCAGCTCCAACAAGTCTTCCCCTTGGCGACGTGCCCAGATCACTTCCACCTGCGCCTTGCTTGGCAGCGGCTGGCGCTCGTGCTCGTCTTCGATCTGGATCACTGC > NC_002947/1204591‑1204731 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |