| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1297091 | NA (NA) | 3 (0.060) | 3/252 | NT | NA | coding (279/1329 nt) | PP_1133 | transposase |
| ? | NC_002947 | = 1297143 | NA (NA) | coding (331/1329 nt) | PP_1133 | transposase | |||||
CACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296938‑1297091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccagaTCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCT < NC_002947/1297143‑1296997 CACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAAT < 5:242998/148‑1CACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAAT < 6:118431/148‑1CACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGCTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATG > 5:167412/1‑149CACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTAGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATG > 3:137048/1‑149CACGTCCTTTACTGACGACCTACTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAAT < 2:256074/148‑1 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGC > 2:272810/1‑149 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGC < 4:79078/149‑1 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGC > 2:101582/1‑149 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGC > 4:145044/1‑149 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGC < 7:37389/149‑1 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGC > 7:89411/1‑149 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATG < 3:170049/148‑1 ACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCAATGGATTCAACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGAGGTTTTGACGTTTATCTCGTCAATG > 4:10118/1‑148 ACGTCCTTAACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTAATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGC < 2:36906/149‑1 CCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCA > 6:40586/1‑147 CTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA < 3:273797/148‑1 CTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA < 8:74864/148‑1 CCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA < 6:42439/136‑1 CCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCAACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA > 5:42439/1‑136 AAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA > 2:156457/1‑129 AAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA < 1:156457/129‑1 CATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGAC < 2:140993/149‑1 TTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCA < 5:43592/127‑1 TTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCA > 6:43592/1‑127 TGCCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGATTCCAATAAACCCCCGTGGATTCCATGGCAA < 1:117826/148‑1 GCCAGATCCACTGGCAATCCAGCACATCGTGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGATGAGA‑ATCTCGTAAATTGGAATCAAATAAACCCCCTTGGATTCAATGGCAAC > 1:185572/1‑149 GCCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAAC < 2:185572/148‑1 GCCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATT > 2:41515/1‑113 GCCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATT < 1:41515/113‑1 CCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACG < 7:113889/148‑1 CCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAAC < 4:97341/147‑1 CCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCAATGGCAACGA > 1:118425/1‑149 CCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATT < 2:28741/137‑1 CCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCC < 8:55482/128‑1 CCAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCC > 7:55482/1‑128 CCAGATCCACTGGCAATCCAGCACATC‑TGAATTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATT > 1:28741/1‑137 CCAGATCCACTGACAATCCACCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGACATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAA < 1:235551/147‑1 CAGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTTCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGAC < 3:214593/149‑1 cGATCCACTGGCAATCCAGCACTTC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTC < 6:237308/102‑1 AGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCGAATAACCCCCCGTGGATTCCATGGCAACGACC > 8:143743/1‑149 AGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACC < 6:70281/149‑1 AGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACC < 3:86429/149‑1 AGATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACC > 1:114713/1‑149 AGATCCACTGGCAATCCAGCACATC‑TGATTTACGACCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACC < 1:24565/149‑1 GATCCACTGGCAATCCATCACATC‑TGATTTACGGCCCGTGATTTGCCGATTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGTAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCT < 5:97002/149‑1 GATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCT < 5:291789/149‑1 ATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGA < 1:220560/94‑1 ATCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGA > 2:220560/1‑94 CACGTCCTTTACTGACGACCTGCTCAAGATGGCTAACTGGCTTGAAAGCCTGGGGATCAAGGTCGTTGCCATGGAATCCACGGGGGTTTATTGGATTCCAATTTACGAGATTCTCAGCGAGCGCGGTTTTGACGTTTATCTCGTCAATGCCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1296938‑1297091‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccagaTCCACTGGCAATCCAGCACATC‑TGATTTACGGCCCGTGATTTGCCGAGTTGCTCTGGCATTGACGAGATAAACGTCAAAACCGCGCTCGCTGAGA‑ATCTCGTAAATTGGAATCCAATAAACCCCCGTGGATTCCATGGCAACGACCT < NC_002947/1297143‑1296997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |