New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1366340	60 (1.150)	4 (0.080)	4/262	NT	5.9%	coding (360/711 nt)	PP_1191	S4 domain‑containing protein
	?	NC_002947	= 1366386	69 (1.350)					coding (314/711 nt)	PP_1191	S4 domain‑containing protein

CCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1366215‑1366340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCGGCCTGCAG  <  NC_002947/1366386‑1366340                                                                                                                                                                               CCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCGGCAGGCCTGCGTGGCACCGCTG                          >  2:55501/1‑149                      GCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCGGCCTG     <  1:55501/149‑1                                                                   TCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCGGCCTGCAG  <  7:102443/107‑1                                                                   TCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACCGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCGGCCTGCAG  >  8:102443/1‑107                                                                                                                                                                               CCACGCGCCAGGCGTTCCAGCGCCTGGGGGGTGGTTTCGCCGCGCACTTCAATGATGAACTCCTGCTCCAGGCGACGCAGGTCGGCCTCGATCTTGCGGGATACCCGCCAGTCCTGGGTAAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1366215‑1366340 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGGCAGGCCTGCGTGGCACCGCTGGAGCGTGGCGCCAGCGGCCTGCAG  <  NC_002947/1366386‑1366340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.