New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1411088 =	59 (1.130)	3 (0.060)	3/258	NT	5.1%	coding (847/1437 nt)	PP_1232	hypothetical protein
	?	NC_002947	1411125 =	54 (1.070)					coding (810/1437 nt)	PP_1232	hypothetical protein

TCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1411129‑1411088 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTTGGGCGCCTGGTCGGCGCGGTTACGGGTGTCGGCAATACGTGATTCGGTCACCGGGTGGGTCAGCAGGAATTCCGGCGGTTTGGCGTCATAGCGATACTGGCGTGCC  >  NC_002947/1411125‑1411272                                                                                                                                                                                                TCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTTGGGCGCCTGGTCGGCGCGGTTACGGGTGTCGGCAATACGTGATTCGGTCACCGGGTGGGTCAG                                             >  7:243359/1‑147   CGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTTGGGCGCCTGGTCGGCGCGGTTACGGGTGTCGGCAATACGTGATTCGGTCACCGGGTGGGTCAGCA                                           >  3:245550/1‑147   CGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTTGGGCGCCTGGTCGGCGCGGTTACGGGTGTCGGCAATACGTGATTCGGTCACCGGGTGGGTCAGCA                                           <  4:245550/147‑1                                       GGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTTGGGCGCCTGGTCGGCGCGGTTACGGGTGTCGGCAATACGTGATTCGGTCACCGGGTGGGTCAGCAGGAATTCCGGCGGTTTGGCGTCATAGCGATACTGGCGT     <  8:10620/149‑1                                          CGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTTGGGCGCCTGGTCGGCGCGGTTACGGGTGTCGGCAATACGTGATTCGGTCACCGGGTGGGTCAGCAGGAATTCCGGCGGTTTGGCGTCATAGCGATACTGGCGTGtc  <  1:284155/149‑3                                                                                                                                                                                                TCCGCGCCCGGGTGGCACTGATCTACGAGGGCACACCGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1411129‑1411088 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTTGGGCGCCTGGTCGGCGCGGTTACGGGTGTCGGCAATACGTGATTCGGTCACCGGGTGGGTCAGCAGGAATTCCGGCGGTTTGGCGTCATAGCGATACTGGCGTGCC  >  NC_002947/1411125‑1411272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.