| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1605184 = | 56 (1.080) | 3 (0.060) | 3/252 | NT | 5.6% | coding (1067/1707 nt) | PP_1407 | sulfate transporter |
| ? | NC_002947 | 1605222 = | 49 (0.990) | coding (1029/1707 nt) | PP_1407 | sulfate transporter | |||||
GCCATCAGCGGTGCCGACTCGCGCACTGCAGTCAACGACATGGTCGGTGGCAAAAGCCAGCTGGTAGGCATCATCGCGGCACTGGTGATTGCCCTGATCCTGCTGTTCTTCACCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1605335‑1605184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgcGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGT > NC_002947/1605222‑1605364 GCCATCAGCGGTGCCGACTCGCGCACTGCAGTCAACGACATGGTCGGTGGCAAAAGCCAGCTGGTAGGCATCATCGCGGCACTGGTGATTGCCCTGATCCAGCTGTTCTTCACCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTGG < 5:24771/148‑1 CATCAGCGGTGCCGACTCGCGCACTGCAGTCAACGACATGGTCGGTGGCAAAAGCCAGCTGGTAGGCATCATCGCGGCACTGGTGATTGCCCTGATCCTGCTGTTCTTCACCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTGGGCG > 2:76533/1‑149 CCGACTCGCGCACTGCAGTCAACGACATGGTCGGTGGCAAAAGCCAGCTGGTAGGCATCATCGCGGCACTGGTGATTGCCCTGATCCTGCTGTTCTTCACCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTG < 7:82277/134‑1 CCGACTCGCGCACTGCAGTCAACGACATGGTCGGTGGCAAAAGCCAGCTGGTAGGCATCATCGCGGCACTGGTGATTGCCCTGATCCTGCTGTTCTTCACCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTG > 8:82277/1‑134 TTCACCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACC > 1:73054/1‑149 CCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCCCCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCT > 3:256855/1‑148 GCGCCCATGGCCTGGATCCCGCAGGCTGCGCTGGGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGAT < 2:73054/149‑1 GGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGT < 3:241113/148‑1 GGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCA < 7:232332/93‑1 GGCGCGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCA > 8:232332/1‑93 GCCATCAGCGGTGCCGACTCGCGCACTGCAGTCAACGACATGGTCGGTGGCAAAAGCCAGCTGGTAGGCATCATCGCGGCACTGGTGATTGCCCTGATCCTGCTGTTCTTCACCGCGCCCATGGCCTGGATCCCGCAGGCTGCGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1605335‑1605184‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgcGGTGAAGAACAGCAGGATCAGGGCAATCACCAGTGCCGCGATGATGCCTACCAGCTGGCTTTTGCCACCGACCATGTCGTTGACTGCAGTGCGCGAGTCGGCACCGCTGATGGCAAAGCCCTGGGAAACCCCGGCCGCCAGGT > NC_002947/1605222‑1605364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |