| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1615023 = | 63 (1.210) | 5 (0.100) | 5/258 | NT | 8.3% | coding (729/1056 nt) | PP_1415 | membrane protein |
| ? | NC_002947 | 1615099 = | 49 (0.970) | coding (653/1056 nt) | PP_1415 | membrane protein | |||||
CCTTGCTCTGGCAGCGCTTGCGCCAGCCCAACCCCTGGCTGTTCGGGCCATTGCTGGTAGCGGCTACGGTCAGCCTGGCCGGCAACCTGCAGATCGCCCTGCCCAATGGCGCCAGCCAGATCGGCCAGTGGCTCATCGGCAGCGGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1615174‑1615023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGCCAGCCCCAGCTCACGCTACCGGTGTGGTTCAGTGGTA > NC_002947/1615099‑1615246 CCTTGCTCTGGCAGCGCTTGCGCCAGCCCAACCCCTGGCTGTTCGGGCCATTGCTGGTAGCGGCTACGGTCAGCCTGGCCGGCAACCTGCAGATCGCCCTGCCCAATGGCGCCAGCCAGATCGGCCAGTGGCTCATCGGCAGCGGCCTG > 3:308086/1‑149 CAGCCTGGCCGGCAACCTGCAGATCGCCCTGCCCAATGGCGCCAGCCAGATCGGCCAGTGGCTCATCCGCAGCGGCCTGGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGC > 8:277603/1‑148 CCTGGCCGGCAACCTGCAGATCGCCCTGCCCAATGGCGCCAGCCAGATCGGCCAGTGGCTCATCGGCAGCGGCCTGGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCA > 7:165124/1‑147 GCAACCTGCAGATCGCCCTGCCCAATGGCGCCAGCCAGATCGGCCAGTGGCTCATCGGCAGGTTGCCGGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGC > 4:123290/1‑148 AATGGCGCCAGCCAGATCGGCCAGTGGCTCATCGGCAGGTTGCCGGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAAT < 3:123290/149‑1 GCCAGATCGGCCAGTGGCTCATCGGCAGCGGCCTGGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGC < 7:277603/149‑1 GGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGCCAGCCCCAGCTCACGCTACCGGTGTGGTTCAGTG < 2:118724/149‑1 GGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGCCAGCCCCAGCTCACGCTACCGGTGTGGTTCAGTG > 4:16312/1‑149 GGCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGCCAGCCCCAGCTCACGCTACCGGTGTGGTTCAGTG < 8:242801/149‑1 GCCAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGCCAGCCCCAGCTCACGCTACCGGTGTGGTTCAGTGG > 3:141858/1‑149 CAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGACCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGCCAGCCACAGCTCACGCTACCGGTGTGGTTCAGTGGTA > 7:225348/1‑149 CCTTGCTCTGGCAGCGCTTGCGCCAGCCCAACCCCTGGCTGTTCGGGCCATTGCTGGTAGCGGCTACGGTCAGCCTGGCCGGCAACCTGCAGATCGCCCTGCCCAATGGCGCCAGCCAGATCGGCCAGTGGCTCATCGGCAGCGGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1615174‑1615023‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGGCTGACCGTAGCCGCTACCAGCAATGGCCCGAACAGCCAGGGGTTGGGCTGGCGCAAGCGCTGCCAGAGCAAGGCAACGGCAACACCCAAGGGCGCAATCAATGCCAGCCAGCCCCAGCTCACGCTACCGGTGTGGTTCAGTGGTA > NC_002947/1615099‑1615246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |