New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1652813 =55 (1.060)3 (0.060) 3/258 NT 5.4% coding (3956/4527 nt) PP_1449 hypothetical protein
?NC_002947 1652859 = 52 (1.030)coding (3910/4527 nt) PP_1449 hypothetical protein

ATGGCCGGCTCAAGGTAGAGCTCGACAAGCGCGATAACCTCACCTGGAATACCAGTGACCTGCGCGCCGAGCGCATCGACCTGCAAAGCCGCGGCGATACCCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1652963‑1652813
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaTGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATGTTGAAAC  >  NC_002947/1652859‑1653005
                                                                                                                                                                                                                                                                                                          
ATGGCCGGCTCAAGGTAGAGCTCGACAAGCGCGATAACCTCACCTGGAATACCAGTGACCTGCGCGCCGAGCGCATCGACCTGCAAAGCCGCGGCGATACCCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATC                                                                                                                                                       <  1:5663/149‑1
                                                                                                    CCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGC                                                   >  8:51511/1‑149
                                                                                                       CATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGG                                                >  2:51730/1‑149
                                                                                                              AGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCA                                         <  1:51730/149‑1
                                                                                                                                              CACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATG         <  7:51511/149‑1
                                                                                                                                                     GATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATGTTGAAAC  >  2:287378/1‑149
                                                                                                                                                                                                                                                                                                          
ATGGCCGGCTCAAGGTAGAGCTCGACAAGCGCGATAACCTCACCTGGAATACCAGTGACCTGCGCGCCGAGCGCATCGACCTGCAAAGCCGCGGCGATACCCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1652963‑1652813
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaTGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATGTTGAAAC  >  NC_002947/1652859‑1653005

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.