New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1652813 = | 55 (1.060) | 3 (0.060) | 3/258 | NT | 5.4% | coding (3956/4527 nt) | PP_1449 | hypothetical protein |
? | NC_002947 | 1652859 = | 52 (1.030) | coding (3910/4527 nt) | PP_1449 | hypothetical protein |
ATGGCCGGCTCAAGGTAGAGCTCGACAAGCGCGATAACCTCACCTGGAATACCAGTGACCTGCGCGCCGAGCGCATCGACCTGCAAAGCCGCGGCGATACCCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1652963‑1652813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaTGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATGTTGAAAC > NC_002947/1652859‑1653005 ATGGCCGGCTCAAGGTAGAGCTCGACAAGCGCGATAACCTCACCTGGAATACCAGTGACCTGCGCGCCGAGCGCATCGACCTGCAAAGCCGCGGCGATACCCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATC < 1:5663/149‑1 CCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGC > 8:51511/1‑149 CATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGG > 2:51730/1‑149 AGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCA < 1:51730/149‑1 CACAATCGATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATG < 7:51511/149‑1 GATGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATGTTGAAAC > 2:287378/1‑149 ATGGCCGGCTCAAGGTAGAGCTCGACAAGCGCGATAACCTCACCTGGAATACCAGTGACCTGCGCGCCGAGCGCATCGACCTGCAAAGCCGCGGCGATACCCGCATCGAGAGTGCCACCCTGGATGCAGGGCATATTGGCGGCACAATCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1652963‑1652813 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaTGCGGGTATCGCCGCGGCTTTGCAGGTCGATGCGCTCGGCGCGCAGGTCACTGGTATTCCAGGTGAGGTTATCGCGCTTGTCGAGCTCTACCTTGAGCCGGCCATGCAGGCCGCGGGTGTCCAAGGCGCCCTTGGCCATGTTGAAAC > NC_002947/1652859‑1653005 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |