| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1680339 | 55 (1.060) | 3 (0.060) | 3/256 | NT | 5.4% | coding (462/1200 nt) | PP_1475 | CAIB/BAIF family protein |
| ? | NC_002947 | = 1680373 | 53 (1.060) | coding (428/1200 nt) | PP_1475 | CAIB/BAIF family protein | |||||
TACAGGGCCACGTCCACCACCTGGCCCTGGCCGCCATTGACTTCCCGGTGGCGCAGCGCCATCAGCGCGCCGATCACCCCCCACAGGGCGGCAATCGAGTCACCGATGGAAATCCCCGTGCGCACTGGCGGGCGGTCATCGAAACCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1680190‑1680339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATCACCGGTTTCGATGACCGCCCGCCAGTGCGCACGGGGATTTCCATCGGTGACTCGATTGCCGCCCTGTGGGGGGTGATCGGCGCGCTGATGGCGCTGCGCCACCGGGAAGTCA < NC_002947/1680373‑1680227 TACAGGGCCACGTCCACCACCTGGCCCTGGCCGCCATTGACTTCCCGGTGGCGCAGCGCCATCAGCGCGGCGATCACCCCCCACAGGGCGGCAATCGAGTCACCGATGGAAATCCCCGTGCGCACTGGCGGGCGGTCATCGAAACCGGT < 4:271049/149‑1TACAGGGCCACGTCCACCACCTGGCCCTGGCCGCCATTGACTTCCCGGTGGCGCAGCGCCATCAGCGCGCCGATCACCCCCCACAGGGCGGCAATCGAGTCACCGATGGAAATCCCCGAGCGCACTGGCGGGCGGTCATCGAAACCGGT < 1:29118/149‑1 GTGGCGCAGCGCCATCAGCGCGCCGATCACCCCCCACAGGGCGGCAATCGAGTCACCGATGGAAATCCCCGTGCGCACTGGCGGGCGGTCATCGAAACCGGTGCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATCACCGGTTTCGA < 4:162305/149‑1 ATCAGCGCGCCGATCACCCCCCACAGGGCGGCAATCGAGTCACCGATGGAAATCCCCGTGCGCACTGGCGGGCGGTCATCGAAACCGGTGCCGTAGGCGAGTTGATGGGCGGCCTGCGCTACATCACCG > 3:60068/1‑129 ATCAGCGCGCCGATCACCCCCCACAGGGCGGCAATCGAGTCACCGATGGAAATCCCCGTGCGCACTGGCGGGCGGTCATCGAAACCGGTGCCGTAGGCGAGTTGATGGGCGGCCTGCGCTACATCACCG < 4:60068/129‑1 CGGTGCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATGACCGGTTTCGATGACCGCCCGCCAGTGCGCACGGGGATTTCCATCGGTGACTCGATTGCCGCCCTGTGGGGGGTGATCGGCGCGCTGATGGCGCTGCGCCACCGGGAA < 2:151453/148‑1 CGGTGCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATCACCGGTTTCGATGACCGCCCGCCAGTGCGCACGGGGATTTCCATCGGTGACTCGATTGCCGCCCTGTGGGGGGTGATCGGCGCGCTGATGGCGCTGCGCCACCGGGAA < 6:280860/148‑1 GGTGCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATCACCGGTTTCGATGACCGCCCGCCAGTGCGCACGGGGATTTCCATCGGTGACTCGATTGCCGCCCTGTGGGGGGTGATCGGCGCGCTGATGGCGCTGCGCCACCGGGAAGT > 5:147977/1‑149 GGTGCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATCACCGGTTTCGATGACCGCCCGCCAGTGCGCACGGGGATTTCCATCGGTGACTCGATTGCCGCCCTGTGGGGGGTGATCGGCGCGCTGATGGCGCTGCGCCACCGGGAAGT < 6:173349/149‑1 TGCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATCACCGGTTTCGATGACCGCCCGCCAGTGCGCACGGGGATTTCCATCGGTGACTCGATTGCCGCCCTGTGGGGGGTGATCGGCGCGCTGATGGCGCTGCGCCACCGGGAAGTCA < 1:271835/149‑1 TACAGGGCCACGTCCACCACCTGGCCCTGGCCGCCATTGACTTCCCGGTGGCGCAGCGCCATCAGCGCGCCGATCACCCCCCACAGGGCGGCAATCGAGTCACCGATGGAAATCCCCGTGCGCACTGGCGGGCGGTCATCGAAACCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1680190‑1680339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgCCGTAGGCGAGTCGATGGGCGGCCTGCGCTACATCACCGGTTTCGATGACCGCCCGCCAGTGCGCACGGGGATTTCCATCGGTGACTCGATTGCCGCCCTGTGGGGGGTGATCGGCGCGCTGATGGCGCTGCGCCACCGGGAAGTCA < NC_002947/1680373‑1680227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |