| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1723453 | 65 (1.250) | 5 (0.100) | 4/254 | NT | 7.6% | coding (2086/3066 nt) | PP_1517 | RND family transporter |
| ? | NC_002947 | = 1723478 | 60 (1.210) | coding (2111/3066 nt) | PP_1517 | RND family transporter | |||||
TCAGCACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1723301‑1723453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtgcACGTTCACCACATGCGGGTTCTCGCGCACCTTGTCCGCCACTTCACGGGCCAGTGCACGGGCCTTCTCGATATGCTCGCCAGTGACCCGGAACTGCACCGGGTAGCCCACGGGCGGGCCGTTTTCCAGGCGCGTGACCCGGGCGC < NC_002947/1723478‑1723334 TCAGCACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAG < 2:42558/149‑1TCAGCACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAG > 4:257990/1‑149 GCACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGTG > 8:107018/1‑149 GCACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGACCCGTGAACTGGCCCGTGAAGTGGCGGACAAGGTG > 6:99977/1‑149 CACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGG < 7:108027/146‑1 CACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGG > 8:108027/1‑146 ACGGTGGACCAGCACTTCCCCGACCTGCCCGCCCGGGTCACGCGCCTGGAAAACCGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATAACGAGAAGGCCCGTGCACTGCCCCGTGAAGTGGCGGACAAGcagcg > 2:317432/1‑144 CGCGCCCGGGTCACGCGCCTGGAAAACGGCCAGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAATGTGCACGTTCACCACATGCGGGTTCTCGCGCA < 5:173436/149‑1 CTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGTGCACGTTCACCACATGCGGGTTCTCGCGCACC > 5:219239/1‑133 CTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGTGCACGTTCACCACATGCGGGTTCTCGCGCACC < 6:219239/133‑1 GAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGTGCACGTTCACCACATGCGGGTTCTCGCGCACC > 1:304254/1‑130 GAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGTGCACGTTCACCACATGCGGGTTCTCGCGCACC < 2:304254/130‑1 CCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGT < 5:317081/74‑1 CCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGT > 6:317081/1‑74 ggGCACGTTCCCCACATGCGGGTTCGCGCGCACCTTGTCCGCCACTTCACGGGCCAGTGCACGGGCCGTCTTGATATGCTCGCCAGTGACCCGGAACTGCACCGGGTAGCCCACGGGCGGGCCGTTTTCCAGGCGCGTGACCCGGGCGC < 3:59000/147‑1 TCAGCACGGTGGACCAGCAGTTCCCCGACCTGCGCGCCCGGGTCACGCGCCTGGAAAACGGCCCGCCCGTGGGCTACCCGGTGCAGTTCCGGGTCACTGGCGAGCATATCGAGAAGGCCCGTGCACTGGCCCGTGAAGTGGCGGACAAGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1723301‑1723453‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtgcACGTTCACCACATGCGGGTTCTCGCGCACCTTGTCCGCCACTTCACGGGCCAGTGCACGGGCCTTCTCGATATGCTCGCCAGTGACCCGGAACTGCACCGGGTAGCCCACGGGCGGGCCGTTTTCCAGGCGCGTGACCCGGGCGC < NC_002947/1723478‑1723334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |