New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1833038 =	74 (1.420)	5 (0.100)	5/252	NT	7.8%	coding (303/366 nt)	dgkA‑I	diacylglycerol kinase
	?	NC_002947	1833078 =	48 (0.970)					coding (343/366 nt)	dgkA‑I	diacylglycerol kinase

AGACCTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1833192‑1833038 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATGGCCGAGGTCTGGTACTTCTGTTTGTGCCAGATGAAGT  >  NC_002947/1833078‑1833219                                                                                                                                                                                                                                                                                                           AGACCTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCG                                                                                                                                                      <  3:270553/149‑1  GACCTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGG                                                                                                                                                     <  1:243231/149‑1  GACCTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGG                                                                                                                                                     <  2:155154/149‑1     CTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGGCGC                                                                                                                                                  >  2:64684/1‑149     CTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGG                                                                                                                                                     <  1:320251/146‑1     CTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGG                                                                                                                                                     >  2:320251/1‑146        GGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGGCGCT                                                                                                                                                 <  6:244894/147‑1                                                                                                              CCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGGCGCTGGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCA                                         >  2:135956/1‑149                                                                                                                ACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGGCGCTGGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATG                                       >  2:299392/1‑149                                                                                                                  ACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGGCGCTGGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATGGC                                     >  5:240481/1‑149                                                                                                                         CCACCATGGTCAGGGCCACCAGCTGTGCGGCGCTGGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATGGCCGAGGTC                              <  1:299392/149‑1                                                                                                                                  TCAGGGCCACCAGCTGTGCGGCGCTGGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATGGCCGAGGTCTGGTACTTC                     <  6:240481/149‑1                                                                                                                                                     GGCGCTGGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATGGCCGAGGTCTGGTACTTCTGTTTGTGCCAGATGAAGT  <  8:65179/149‑1                                                                                                                                                     GGCGCTGGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATGGCCGAGGTCTGGTACTTCTGTTTGTGCCAGATGAAG   >  1:70010/1‑148                                                                                                                                                                                                                                                                                                           AGACCTCGGCCATGCGTGAGTTTCTCGAGCTATGCCGCAACTTCACTGCGGGCTTTACCCGCAGTGACGAGATCGTGCTGCCGCCGATCGCTTAAAGCAGGATCACACCCCACACCAGCGCCACCATGGTCAGGGCCACCAGCTGTGCGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1833192‑1833038 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgGTGTGGGGTGTGATCCTGCTTTAAGCGATCGGCGGCAGCACGATCTCGTCACTGCGGGTAAAGCCCGCAGTGAAGTTGCGGCATAGCTCGAGAAACTCACGCATGGCCGAGGTCTGGTACTTCTGTTTGTGCCAGATGAAGT  >  NC_002947/1833078‑1833219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.