| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1931789 = | 61 (1.170) | 5 (0.100) | 5/252 | NT | 8.5% | intergenic (‑62/+109) | apeB/rluA | M18 family aminopeptidase/bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA |
| ? | NC_002947 | 1931876 = | 50 (1.010) | intergenic (‑149/+22) | apeB/rluA | M18 family aminopeptidase/bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA | |||||
TCTTCGCGGCTAAAGCCGCTCCTGCAAGGGCCGCACTGCGCTCAGGGGCTGTGCAATACCTGTGGTAGCGGGGGTTAGCTGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1931875‑1931789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaagaGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCATCGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCG > NC_002947/1931876‑1932023 TCTTCGCGGCTAAAGCCGCTCCTGCAAGGGCCGCACTGCGCTCAGGGGCTGTGCAATACCTGTGGTAGCGGGGGTTAGCTGCGAAGAGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCG > 2:11160/1‑149 TTCGCGGCTAAAGCCGCTCCTGCAAGGGCCGCACTGCGCTCAGGGGCTGTGCAATACCTGTGGTAGCGGGGGTTAGCTGCGAAGAGGCCGGTACAGGCCCTGCAAAATCAGAA > 1:88626/1‑113 TTCGCGGCTAAAGCCGCTCCTGCAAGGGCCGCACTGCGCTCAGGGGCTGTGCAATACCTGTGGTAGCGGGGGTTAGCTGCGAAGAGGCCGGTACAGGCCCTGCAAAATCAGAA < 2:88626/113‑1 TAAAGCCGCTCCTGCAAGGGCCGCACTGCGCTCAGGGGCTGTGCAATACCTGTGGTAGCGGGGGTTAGCTGCGAAGAGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGT > 3:84235/1‑149 GTTAGCTGCGAAGAGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCATCGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGT < 4:84235/149‑1 GAAGAGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCATCGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACA < 4:2784/149‑1 AAGAGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGT‑AAGCTCAGCATCGAGGCATTCAGGCACAGCCGCGCATTGGCCGCCAGGGCTTGCGGGTTGGCGTACAGG > 7:99724/1‑149 AGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCATCGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCG < 2:80158/149‑1 TCTTCGCGGCTAAAGCCGCTCCTGCAAGGGCCGCACTGCGCTCAGGGGCTGTGCAATACCTGTGGTAGCGGGGGTTAGCTGCGAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1931875‑1931789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaagaGGCCGGTACAGGCCCTGCAAAATCAGAACGGCGCAGGGCACTCGAACTTCAACCGCTGCCCGGACACCGGGTGGGTAAAGCTCAGCATCGAGGCATGCAGGCACAGCCGCTCATGGGCCGCCAGGGCTTGCGGGTTGGCGTACAGGCG > NC_002947/1931876‑1932023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |