| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2092305 = | 68 (1.310) | 4 (0.080) | 4/254 | NT | 6.4% | coding (1631/1680 nt) | deaD | ATP‑dependent DEAD‑box RNA helicase DeaD |
| ? | NC_002947 | 2092349 = | 53 (1.070) | coding (1675/1680 nt) | deaD | ATP‑dependent DEAD‑box RNA helicase DeaD | |||||
GTTCGACTGAAGGGCCTCTTCGCGGGCAAGCCCGCGAAAGGGCCGGTACAGGTAAAAAAAATCCCCGACCTAAGCCGGGGATTTTTTCGTTACGCCAGGATCAATCCTCGCGGTAGCGACGCAGCTTCAGCTGCTTGCCAGCCACGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2092454‑2092305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTG > NC_002947/2092349‑2092495 GTTCGACTGAAGGGCCTCTTCGCGGGCAAGCCCGCGAAAGGGCCGGTACAGGTAAAAAAAATCCCCGACCTAAGCCGGGGATTTTTTCGTTACGCCAGGATCAATCCTCGCGGTAGCGACGCAGCTTCAGCTGCTTGCCAGCCACGC > 8:9489/1‑147 ATCAATCCTCGCGGTAGCGACGCAGCTTCAGCTGCTTGCCAGCCACGCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT > 5:149418/1‑148 ATCCTCGCGGTAGCGACGCAGCTTCAGCTGCTTGCCAGCCACGCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTC > 3:221581/1‑149 TCCTCGCGGTAGCGACGCAGCTTCTACTGCTTGCCAGCCACGCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTC > 1:252123/1‑148 GCTGCTTGCCAGCCACGCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCG < 6:149418/149‑1 CGCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACC > 3:205515/1‑149 GCGAGGATTGATCCTGGCGTAACGAAAAAATCGCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGC > 1:204196/1‑71 GCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCC > 1:271890/1‑149 GCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCC > 5:282636/1‑149 GCGAGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGC < 2:204196/70‑1 AGGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTG < 2:65532/149‑1 GTTCGACTGAAGGGCCTCTTCGCGGGCAAGCCCGCGAAAGGGCCGGTACAGGTAAAAAAAATCCCCGACCTAAGCCGGGGATTTTTTCGTTACGCCAGGATCAATCCTCGCGGTAGCGACGCAGCTTCAGCTGCTTGCCAGCCACGCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2092454‑2092305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgagGATTGATCCTGGCGTAACGAAAAAATC‑CCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTG > NC_002947/2092349‑2092495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |