| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2134397 | 53 (1.020) | 5 (0.100) | 5/256 | NT | 7.9% | coding (2354/2448 nt) | fadE | medium‑long chain acyl‑CoA dehydrogenase |
| ? | NC_002947 | = 2134461 | 66 (1.320) | coding (2290/2448 nt) | fadE | medium‑long chain acyl‑CoA dehydrogenase | |||||
GAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATCGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2134257‑2134397‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccCCCGGCCAGTCCGGTATCGACGCCGCCGTCAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGGCTGCACGAGGCCGAACAGGCTCGGCGCAAGGTGATCGATGTCGATGCCTTCGACAAGGCGCAGTTGCTCGCCGTACCGGG < NC_002947/2134461‑2134316 GAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATCGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCA > 7:272340/1‑138GAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATCGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCA < 8:272340/138‑1 GGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATGGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCAGCCCCCGGCCAGTCCG > 6:123165/1‑149 CGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATCGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCAGCCCCCGGCCAGTCCGGTATC > 3:4783/1‑148 CCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATGGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCAGCCCCCGGCCAGTCCGGTATCGACGCCGCCGTCAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGG < 5:123165/148‑1 CCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATCGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCAGCCCCCGGCCAGTCCGGTATCGACGCCGCCGTCAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGGC < 7:265205/149‑1 CGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATCGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCAGCCCCCGGCCAGTCCGGTATCGACGCCGCCGTCAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGGCTG < 4:4783/149‑1 AGCCGCCGGCCAGTCCGTTATCGACGCCGCCGTAAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGGCTGCACGAGGCCGAACAGGCTCGGCGCAAGGTGATCGATGTCGATGCCTTCGACAAGGCGCAGTTGCTCGCCGTACCGG < 8:174711/149‑1 AGCCCCCGGCCAGTCCGGTATCGACGCCGCCGTCAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGGCTGCACGAGGCCGAACAGGCTCGGCGCAAGGTGATCGATGTCGATGCCTTCGACAAGGCGCAGTTGCTCGCCGTACCGG < 4:252231/149‑1 GCCCCCGGCCAGTCCGGTATCGACGCCGCCGTCAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGGCTGCACGAGGCCGAACAGGCTCGGCGCAAGGTGATCGATGTCGATGCCTTCGACAAGGCGCAGTTGCTCGCCGTACCGGG < 7:31985/149‑1 GAAACGGGGGGCGGAGTATACGCCGCCCCCCGTTTCTCGCGAAGGGTCAGCGCACCTTGCCCGGTACGGCGAGCAACTGCGCCTTGTCGAAGGCATCGACATCGATCACCTTGCGCCGAGCCTGTTCGGCCTCGTGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2134257‑2134397‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccCCCGGCCAGTCCGGTATCGACGCCGCCGTCAAGGCAGGCGTGCTGCAACCCGACGATGGCCAGCGGCTGCACGAGGCCGAACAGGCTCGGCGCAAGGTGATCGATGTCGATGCCTTCGACAAGGCGCAGTTGCTCGCCGTACCGGG < NC_002947/2134461‑2134316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |