| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2557455 = | 57 (1.090) | 4 (0.080) | 3/256 | NT | 7.2% | intergenic (‑145/‑286) | PP_2241/fepA | MFS transporter/ferric enterobactin transport system outer membrane subunit |
| ? | NC_002947 | 2557492 = | 49 (0.980) | intergenic (‑182/‑249) | PP_2241/fepA | MFS transporter/ferric enterobactin transport system outer membrane subunit | |||||
TCTTATTTACGAAGTTTACATGTTTGTTACTGAACTTTGCTGAACCGTGATCTTTGCCACAGCGAAGCTTGTGAGCCACGCCGGACTGCCCCCTAAATTTGATAAGCCTTCGCGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2557606‑2557455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaCCGCGAAGGCTTATCAAATTTAGGGGGCAGTCCGGCGTGGCTCACAAGCTTCGCTGTGGCAAAGATCACGGTTCAGCAAAGTTCAGTAACAAACATGTAAACTTCGTAAAT > NC_002947/2557492‑2557602 TCTTATTTACGAAGTTTACATGTTTGTTACTGAACTTTGCTGAACCGTGATCTTTGCCACAGCGAAGCTTGTGAGCCACGCCGGACTGCCCCCTAAATTTGATAAGCCTTCGCGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGG > 8:191628/1‑149 ATTTACGAAGTTTACATGTTTGTTACTGAACTTTGCTGAACCGTGATCTTTGCCACAGCGAAGCTTGTGAGCCACGCCGGACTGCCCCCTAAATTTGATAAGCCTTCGCGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGG < 3:192933/145‑1 GTCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGGCGACCGCGAAGGCTTATCAAATTTAGGGGGCAGTCCGGCGTGGCTCACAAGCTTCGCTGTGGCAAAGATCACGGTTCAGCAAAGTTCAGTAACAAACATGTAAACTTCGTAAA > 6:53921/1‑148 TCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGGCGACCGCGAAGGCTTATCAAATTTAGGGGGCAGTCCGGCGTGGCTCACAAGCTTCGCTGTGGCAAAGATCACGGTTCAGCAAAGTTCAGTAACAAACATGTAAACTTCGTAAAT > 7:10542/1‑148 TCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGGCGACCGCGAAGGCTTATCAAATTTAGGGGGCAGTCCGGCGTGGCTCACAAGCTTCGCTGTGGCAAAGATCACGGTTCAGCAAAGTTCAGTAA > 5:147491/1‑126 TCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGGCGACCGCGAAGGCTTATCAAATTTAGGGGGCAGTCCGGCGTGGCTCACAAGCTTCGCTGTGGCAAAGATCACGGTTCAGCAAAGTTCAGTAA < 6:147491/126‑1 TCTTATTTACGAAGTTTACATGTTTGTTACTGAACTTTGCTGAACCGTGATCTTTGCCACAGCGAAGCTTGTGAGCCACGCCGGACTGCCCCCTAAATTTGATAAGCCTTCGCGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAACGGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2557606‑2557455‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgaCCGCGAAGGCTTATCAAATTTAGGGGGCAGTCCGGCGTGGCTCACAAGCTTCGCTGTGGCAAAGATCACGGTTCAGCAAAGTTCAGTAACAAACATGTAAACTTCGTAAAT > NC_002947/2557492‑2557602 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |