| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2640361 | 66 (1.270) | 4 (0.080) | 4/248 | NT | 5.9% | coding (296/1479 nt) | PP_2310 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | = 2640397 | 66 (1.360) | coding (260/1479 nt) | PP_2310 | methyl‑accepting chemotaxis transducer | |||||
CATCAGGATCAGCACACACACCGCGTAATTGCTGAAGCGATCGAAGAAGACCTGGCGCAGGCTGGGCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2640207‑2640361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgctcgATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCCTGGATCCTCGGTGAAAACCCGCCGCGTGGCGCACAGGTATTGCGCAATGGCGACCAGCAGTTGGCTGTGCTGGCCCAGTCGCCCAGCCTGCGCCAGGTCTTCTT < NC_002947/2640397‑2640250 CATCAGGATCAGCACACACACCGCGTAATTGCTGAAGCGATCGAAGAAGACCTGGCGCAGGCTGGGCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGG < 2:193954/149‑1CATCAGGATCAGCACACACACCGCGTAATTGCTGAAGCGATCGAAGAAGACCTGGCGCAGGCTGGGCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGG > 5:215556/1‑149 TGAAGCGATCGAAGAAGACCTGGCGCAGGCTGGGCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGC > 3:172863/1‑120 TGAAGCGATCGAAGAAGACCTGGCGCAGGCTGGGCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGC < 4:172863/120‑1 GCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGCTCGATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGC > 7:271338/1‑133 GCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGCTCGATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGC < 8:271338/133‑1 CAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGCTCGATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCC < 1:240594/124‑1 CAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGCTCGATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCC > 2:240594/1‑124 AGGCGCTCGATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCCTGGATCCTCGGTGAAAACCCGCCGCGTGGCGCACAGGTATTGCGCAATGGCGACCAGCAGTTGGCTGTGCTGGCCCAGTCGCCCAGCCTGCGCCAG < 3:222727/149‑1 GCTCGATGTCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCCTGGATCCTCGGTGAAAACCCGCCGCGTGGCGCACAGGTATTGCGCAATGGCGACCAGCAGTTGGCTGTGCTGGCCCAGTCGCCCA < 7:291182/134‑1 GCTCGATGTCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCCTGGATCCTCGGTGAAAACCCGCCGCGTGGCGCACAGGTATTGCGCAATGGCGACCAGCAGTTGGCTGTGCTGGCCCAGTCGCCCA > 8:291182/1‑134 GATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCCTGGATCCTCGGTGAAAACCCGCCGCGTGGCGCACAGGTATTGCGCAATGGCGACCAGCAGTTGGCTGTGCTGGCCCAGTCGCCCAGCCTGCGCCAGGTCTTCTT < 1:135035/149‑1 GATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCCAGGATCCTCGGTGAAAACCCGCCGCGTGGCGCACAGGTATTGCCCAATCTCGACCAGCAGTAGGCTGTGCTGGCCAAGTCGCCCAGCCTGCGCCAGGgatactt > 7:136395/1‑142 CATCAGGATCAGCACACACACCGCGTAATTGCTGAAGCGATCGAAGAAGACCTGGCGCAGGCTGGGCGACTGGGCCAGCACAGCCAACTGCTGGTCGCCATTGCGCAATACCTGTGCGCCACGCGGCGGGTTTTCACCGAGGATCCAGGCGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2640207‑2640361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgctcgATGCCCTGCGCAACGCCCAAGGCTGGGTAGCATTGCCGAGCGCCTGGATCCTCGGTGAAAACCCGCCGCGTGGCGCACAGGTATTGCGCAATGGCGACCAGCAGTTGGCTGTGCTGGCCCAGTCGCCCAGCCTGCGCCAGGTCTTCTT < NC_002947/2640397‑2640250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |