New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3073066	54 (1.040)	4 (0.080)	4/256	NT	6.6%	coding (772/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3073109	61 (1.220)					coding (815/1671 nt)	PP_2683	two‑component system sensor histidine kinase/response regulator

GCTGCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3072915‑3073066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTGGCAATGGCC  <  NC_002947/3073109‑3072965                                                                                                                                                                                                                                                                                                           GCTGCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGC                                                                                                                                                      >  6:103224/1‑149  CTGCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGG                                                                                                                                                       <  3:16813/147‑1    GCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTC                                                                                                                                                    >  4:241872/1‑148                                             GCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCA‑CAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGG                                                                                                         >  3:252084/1‑149                                                  CGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGA                                                                                                     <  4:161998/149‑1                                                     CCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGGGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCC                                                                                                  <  7:94070/149‑1                                                     CCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCA‑CAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCG                                                                                                 <  4:252084/149‑1                                                                                                                                                    GCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAACACATGCTCGGCCTCTGGCAATGGC   >  7:158300/1‑149                                                                                                                                                    GCTCGTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAAGCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTGGCAATGGC   >  1:80166/1‑149                                                                                                                                                        GTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTTGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGACTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTGGCAATGGCC  <  8:288526/146‑1                                                                                                                                                                                                                                                                                                           GCTGCAACCGTTGAACGCTGCCCGCTTGCTGATTTCGACCTTGCGCGAGCGGCCATTGCCAGAGGCCGAGCATGTGCTGGTGGAGCGTACCCACCAGGCCCTGGAGGGCGCGGAAGACCTGCTGACCGACTTGCTGGACATTTCCCGGCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3072915‑3073066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgTCCAGGCGGTACACGGCCACATCCGGCTTTACCGCCGCCTGGTCGAGCCGGGAAATGTCCAGCAAGTCGGTCAGCAGGTCTTCCGCGCCCTCCAGGGCCTGGTGGGTACGCTCCACCAGCACATGCTCGGCCTCTGGCAATGGCC  <  NC_002947/3073109‑3072965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.