New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3532006 =44 (0.850)6 (0.120) 5/254 NT 12.5% coding (224/762 nt) yeaE methylglyoxal reductase
?NC_002947 3532038 = 42 (0.850)coding (192/762 nt) yeaE methylglyoxal reductase

CAGCCTGCGCGGCATGGCGGCAGCCTGCGAGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3532041‑3532006
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTCGGCATACATCTCGGCGGTGTCGATCAGGTTCAGGCCCAGCTCGATGCCCT  >  NC_002947/3532038‑3532180
                                                                                                                                                                                   
CAGCCTGCGCGGCATGGCGGCAGCCTGCGAGCGCAGGCTGGCATTGTGCGGGTAGCCCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTCGGCATACATCTCGGCGGTGT                                >  2:19834/1‑149
CAGCCTGCGCGGCATGGCGGCAGCCTGCGAGCGCAGCCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCACCCCTTCGGCATACATATCGGCGGTGT                                >  5:189619/1‑149
   CCTGCGCGGCATGGCGGCAGCCTGCGAGCGCAGGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTCGGCATACATCTCGGCGGTGTCGA                             >  6:139894/1‑149
    CTGCGCGGCATGGCGGCAGCCTGCGAGCGCAGGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTCGGCAGACATCTCGGCGGTGTCGAT                            >  3:201972/1‑149
     TGCGCGGCATGGCGGCAGCCTGCGAGCGCAGGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTC                                                    >  7:221362/1‑124
     TGCGCGGCATGGCGGCAGCCTGCGAGCGCAGGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTC                                                    <  8:221362/124‑1
                              GCGCAGGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTCGGCATACATCTCGGCGGTGTCGATCAGGTTCAGGCCCAGCTCGATGCCCT  >  5:241978/1‑149
                              GCGCAGGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTCGGCATACATCTCGGCGGTGTCGATCAGGTTCAGGCCCAGCTCGATGCCCT  >  6:284592/1‑149
                                                                                                                                                                                   
CAGCCTGCGCGGCATGGCGGCAGCCTGCGAGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3532041‑3532006
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagGCTGGCATTGTGCGGGTAGACCTTGCTGACCAGAAATACCCGGTCGCGGCGCCCGGCAATGGCTTGGCCAACGACCTCTTCTGCCCCCCCTTCGGCATACATCTCGGCGGTGTCGATCAGGTTCAGGCCCAGCTCGATGCCCT  >  NC_002947/3532038‑3532180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.