| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3590049 | 71 (1.360) | 4 (0.080) | 4/250 | NT | 5.7% | coding (570/1251 nt) | nicP‑I | porin‑like protein |
| ? | NC_002947 | = 3590087 | 65 (1.330) | coding (608/1251 nt) | nicP‑I | porin‑like protein | |||||
CCGGTGCTGACCTTCAGTGATATTCGCCTGTTGCCACCCACCTATCAGGGCGTGAGTTTGAGCTCGTCGGAAATCGACGGGCTGACTATGCAGGCCGGGCACTTGAAAAGCACCCACCTGCGTAACGAAGGTGGCGATGGCAAGATGAACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3589897‑3590049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacgcgTCGCTTTCGGCCTGTCGCATCGGCACATGGCCGAGCATCGCGTTCATCTTGCCATCGCCACCTTCGTTACGCAGGTGGGTGCTTTTCAAGTGCCCGGCCTGCATAGTCAGCCCGTCGATTTCCGACGAGCTCAAACTCACGCCCTGA < NC_002947/3590087‑3589941 CCGGTGCTGACCTTCAGTGATATTCGCCTGTTGCCACCCACCTATCAGGGCGTGAGTTTGAGCTCGTCGGAAATCGACGGGCTGACTATGCAGGCCGGGCACTTGAAAAGCACCCACCTGCGTAACGAAGGTGGCGATGGCAAGATG < 8:34888/147‑1CCGGTGCTGACCTTCAGTGATATTCGCCTGTTGCCACACACCTATCAGGGCGTGAGTTTGAGCTCGTCGGAAATCGACGGGCTGACTATGCAGGCCGGGCACTTGAAAAGCACACACCTGCGTAACGAAGGTGGCGATGGCAAGATGAA > 7:130349/1‑149 TCGTCGGAAATCGACGGGCTGACTATGCAGGCCGGGCACTTGAAAAGCACCCACCTGCGTAACGAAGGTGGCGATGGCAAGATGAACGCGTCGCTTTCGGCCTGTCGCATCGGCACATGGCCGAGCA < 3:217770/127‑1 TCGTCGGAAATCGACGGGCTGACTATGCAGGCCGGGCACTTGAAAAGCACCCACCTGCGTAACGAAGGTGGCGATGGCAAGATGAACGCGTCGCTTTCGGCCTGTCGCATCGGCACATGGCCGAGCA > 4:217770/1‑127 GCTGACTATGCAGGCCGGGCACTTGAAAAGCACCCACCTGCGTAACGAAGGTGGCGATGGCAAGATGAACGCGTCGCTTTCGGCCTGTCGCATCGGCACATGGCCGAGCATCGCGTT > 3:83944/1‑117 GCTGACTATGCAGGCCGGGCACTTGAAAAGCACCCACCTGCGTAACGAAGGTGGCGATGGCAAGATGAACGCGTCGCTTTCGGCCTGTCGCATCGGCACATGGCCGAGCATCGCGTT < 4:83944/117‑1 GTCGCTTTCGGCCTGTCGCATCGGCACATGGCCGAGCATCTCGTTCATCTAACCATCGCCACCTTCGTTACGCAGGTGGGTGCTTTTCAAGTGCCCGGCCTGCATAGTCAGCCCGTCGATTTCCGACGAGCTCAAACTCACGCCCTGA > 1:80873/1‑148 CCGGTGCTGACCTTCAGTGATATTCGCCTGTTGCCACCCACCTATCAGGGCGTGAGTTTGAGCTCGTCGGAAATCGACGGGCTGACTATGCAGGCCGGGCACTTGAAAAGCACCCACCTGCGTAACGAAGGTGGCGATGGCAAGATGAACGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3589897‑3590049‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacgcgTCGCTTTCGGCCTGTCGCATCGGCACATGGCCGAGCATCGCGTTCATCTTGCCATCGCCACCTTCGTTACGCAGGTGGGTGCTTTTCAAGTGCCCGGCCTGCATAGTCAGCCCGTCGATTTCCGACGAGCTCAAACTCACGCCCTGA < NC_002947/3590087‑3589941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |