New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3607935 =	69 (1.330)	5 (0.100)	5/262	NT	7.4%	coding (1182/2265 nt)	PP_3182	GGDEF domain‑containing protein
	?	NC_002947	3607974 =	58 (1.130)					coding (1143/2265 nt)	PP_3182	GGDEF domain‑containing protein

GCTACAGGCTGTGGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3607983‑3607935 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCACCTGGCTGGCCACTTCGACGAACTGGCGG  >  NC_002947/3607974‑3608121                                                                                                                                                                                                       GCTACAGGCTGTGGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTG                                                  >  6:100472/1‑149        GCTGTGGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTT                                           <  5:100472/149‑1          TGTGGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTC                                                                                 <  7:287110/109‑1          TGTGGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTC                                                                                 >  8:287110/1‑109                 GGGCGTATCCAGCGCCTGCTGGAGCCCGGCCACAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGT                                    >  3:429/1‑147                                                 CAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCACCTGGCTGGCCACTTCGACGAACTGGCGG  <  1:143434/149‑1                                                                                                                                                                                                       GCTACAGGCTGTGGCCGGGCGTATCCAGCGCCTGCTGGAGCCCGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3607983‑3607935 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acAGCCTGTAGCAGCAGGTCACCAATCTTGTGGCCGAGCGAGTCGTTGATCGACTTGAAACGGTCCATGTCGATGAACAGGATCGCCATCAGTCGGCGCTTGCCACGTTGCCGAGTCAGCACCTGGCTGGCCACTTCGACGAACTGGCGG  >  NC_002947/3607974‑3608121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.