New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 404539459 (1.130)3 (0.060) 3/252 NT 5.2% coding (314/1200 nt) PP_3566 MFS transporter
?NC_002947 = 4045441 53 (1.080)coding (267/1200 nt) PP_3566 MFS transporter

GATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4045240‑4045394
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccacCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGGGCAGCTGTTCCTGGGTTACGCACTGCTGATCGGCTTCAGTTCGGTGTCGGTGCAGATGCTCATCCCGCTGGCGGCGCATCTGGCGCCG  <  NC_002947/4045441‑4045297
                                                                                                                                                                                                                                                                                                            
GATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCT                                                                                                                                                         >  1:104684/1‑149
 ATGCCCAGCAACAAGCCTCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTG                                                                                                                                                        <  1:123371/149‑1
 ATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTG                                                                                                                                                        <  8:196142/149‑1
  TGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGG                                                                                                                                                       <  8:163220/149‑1
     CCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCA                                                                                                                                                    >  3:146568/1‑149
      CAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCAC                                                                                                                                                   >  4:7030/1‑149
                                                             GCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAG                                                                                            <  7:183290/149‑1
                                                              CCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGG                                                                                           <  3:183905/149‑1
                                                               CAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGG                                                                                          <  1:216283/149‑1
                                                                                                                                                       CCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGGGCAGCTGTTCCTGGGTTACGCACTGCTGATCGGCTTCAGTTCGGTGTCGGTGCAGATGCTCATCCCGCTGGCGGCGCATCTGGCGCCG  <  8:93254/149‑1
                                                                                                                                                                                                                                                                                                            
GATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4045240‑4045394
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccacCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGGGCAGCTGTTCCTGGGTTACGCACTGCTGATCGGCTTCAGTTCGGTGTCGGTGCAGATGCTCATCCCGCTGGCGGCGCATCTGGCGCCG  <  NC_002947/4045441‑4045297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.