New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4045394 | 59 (1.130) | 3 (0.060) | 3/252 | NT | 5.2% | coding (314/1200 nt) | PP_3566 | MFS transporter |
? | NC_002947 | = 4045441 | 53 (1.080) | coding (267/1200 nt) | PP_3566 | MFS transporter |
GATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4045240‑4045394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccacCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGGGCAGCTGTTCCTGGGTTACGCACTGCTGATCGGCTTCAGTTCGGTGTCGGTGCAGATGCTCATCCCGCTGGCGGCGCATCTGGCGCCG < NC_002947/4045441‑4045297 GATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCT > 1:104684/1‑149 ATGCCCAGCAACAAGCCTCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTG < 1:123371/149‑1 ATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTG < 8:196142/149‑1 TGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGG < 8:163220/149‑1 CCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCA > 3:146568/1‑149 CAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCAC > 4:7030/1‑149 GCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAG < 7:183290/149‑1 CCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGG < 3:183905/149‑1 CAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGG < 1:216283/149‑1 CCACCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGGGCAGCTGTTCCTGGGTTACGCACTGCTGATCGGCTTCAGTTCGGTGTCGGTGCAGATGCTCATCCCGCTGGCGGCGCATCTGGCGCCG < 8:93254/149‑1 GATGCCCAGCAACAAGCCGCCCATGATGTTACCGACCACACGACCACGCTGCTGTTCCGGCGCCAGATGCGCCGCCAGCGGGATGAGCATCTGCACCGACACCGAACTGAAGCCGATCAGCAGTGCGTAACCCAGGAACAGCTGCCCCTGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4045240‑4045394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccacCGCGGTCCTGGCCTGCGTCAGTCTACTGCTGGCAGGCACCAGCAGCAGTGGCCAGGGGCAGCTGTTCCTGGGTTACGCACTGCTGATCGGCTTCAGTTCGGTGTCGGTGCAGATGCTCATCCCGCTGGCGGCGCATCTGGCGCCG < NC_002947/4045441‑4045297 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |