| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4056776 | 50 (0.960) | 3 (0.060) | 3/254 | NT | 5.2% | coding (886/2406 nt) | PP_3575 | ferric siderophore receptor |
| ? | NC_002947 | = 4056833 | 62 (1.250) | coding (829/2406 nt) | PP_3575 | ferric siderophore receptor | |||||
GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4056625‑4056776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaccGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAAT < NC_002947/4056833‑4056688 GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTT > 2:65197/1‑148GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTT > 3:133536/1‑148 GCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGG > 7:33524/1‑149 GCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAG < 1:18710/148‑1 CGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGC < 8:33524/149‑1 TCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGA > 1:100536/1‑148 CACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAA > 1:245402/1‑149 ACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAAT > 7:159923/1‑149 GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4056625‑4056776‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaccGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAAT < NC_002947/4056833‑4056688 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |