New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4056776 | 50 (0.960) | 3 (0.060) | 3/254 | NT | 5.2% | coding (886/2406 nt) | PP_3575 | ferric siderophore receptor |
? | NC_002947 | = 4056833 | 62 (1.250) | coding (829/2406 nt) | PP_3575 | ferric siderophore receptor |
GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4056625‑4056776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaccGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAAT < NC_002947/4056833‑4056688 GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTT > 2:65197/1‑148 GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTT > 3:133536/1‑148 GCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGG > 7:33524/1‑149 GCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAG < 1:18710/148‑1 CGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGC < 8:33524/149‑1 TCACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGA > 1:100536/1‑148 CACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAA > 1:245402/1‑149 ACCGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAAT > 7:159923/1‑149 GTGTGGCCAAGGTCTGCCGAGAGACGCAGGCGCTCGCCTCGAAAATCCAGGCCCAGCACCGCCATTTCGCGGTCGACGCGCTGGTGGTCCCATTCGGTATCACCGGCCTGCTTCACGCCATTGAAGCGCACGCCGAACTGCTGGCCTTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4056625‑4056776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaccGGCAGCTACGCCTCGGCCGGCCAGGCTGGCGGCGCAGTGGACATCGGCCGTCGCTTTGGTGAAGGCCAGCAGTTCGGCGTGCGCTTCAATGGCGTGAAGCAGGCCGGTGATACCGAATGGGACCACCAGCGCGTCGACCGCGAAAT < NC_002947/4056833‑4056688 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |