New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4485707 =	64 (1.230)	5 (0.100)	4/252	NT	8.8%	coding (883/1302 nt)	PP_3977	hypothetical protein
	?	NC_002947	4485745 =	43 (0.870)					coding (921/1302 nt)	PP_3977	hypothetical protein

ACTGAGTCGGCTAGCTCACTCACTTTCACTCGGTGATTTTTCATTGCCTCCTTGAAGGGGACTACCTTTCGAGGGTCACCTACCACCACTGCTATCGGGTTTTCCTGCCAGACTCTCCATTCGAGAGCGTCTGGAGTCAGATCGTCTTTCGAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4485861‑4485707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaatgGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAACGACCGCGTA  >  NC_002947/4485745‑4485889                                                                                                                                                                                                                                                                                                              ACTGAGTCGGCTAGCTCACTCACTTTCACTCGGTGATTTTTCATTGCCTCCTTGAAGGGGACTACCTTTCGAGGGTCACCTACCACCACTGCTATCGGGTTTTCCTGCCAGACTCTCCATTCGAGAGCGTCTGGAGTCAGATCGTCTTT                                                                                                                                                         <  8:92875/149‑1                                                                                                                  TCTCCATTCGAGAGCGTCTGGAGTCAGATCGTCTTTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAG                                        >  5:217802/1‑149                                                                                                                  TCTCCATTCGAGAGCGTCTGGAGTCAGATCGTCTTTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCAAAAGTTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAt                                        >  7:121737/1‑148                                                                                                                    TCCATTCGAGAGCGTCTGGAGTCAGATCGTCTTTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCC                                      >  6:278888/1‑149                                                                                                                      CATTCGAGAGCGTCTGGAGTCAGGTCGTCTTTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGAAGTGGTGGTAGGTGACACTAGAAAGGTAGTCACCTTCAAGGAGTCAAAGAAAAATCAGCGAGTGAAAGGGAGTGAGCTAGCGGA                                    >  6:176474/1‑149                                                                                                                                         TCAGATCGTTTTTGGATTGGAGAGTCTGGCAGGAAATCCCGATTTCAGTGTTGGTAGGTGACCCTCGAAAGGTAGTCCACTTCAAGTAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCT                 <  8:121737/149‑1                                                                                                                                                gtaTTTCGAATGGAGAGTCTGTCAGGAAAACCCGATCTCATTGGTTGTAGGTGAACCTCGAAATGTAGTACCATTCAAGGATGCAATGAAAAATCACCGAGTTAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTTGCGCTAGTAAC           <  6:213136/145‑1                                                                                                                                                GTCTTTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAAC           <  6:217802/148‑1                                                                                                                                                     TCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAACGACCGC     >  3:66078/1‑149                                                                                                                                                     TCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAACGACCGC     >  6:112086/1‑149                                                                                                                                                       GAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAACGACCGC     <  7:288131/147‑1                                                                                                                                                         ATGGAGAGTGTGGCAGGAAAAGCTGATAGGAGTGGTGGTAGGTGACCCTCGATAGGTATTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGTGTGAGCTAGCCGACTCTGTGCTGTGTTGCGCTCGTAACGACCGCGTA  <  4:285299/148‑1                                                                                                                                                                                                                                                                                                              ACTGAGTCGGCTAGCTCACTCACTTTCACTCGGTGATTTTTCATTGCCTCCTTGAAGGGGACTACCTTTCGAGGGTCACCTACCACCACTGCTATCGGGTTTTCCTGCCAGACTCTCCATTCGAGAGCGTCTGGAGTCAGATCGTCTTTCGAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4485861‑4485707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaatgGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAACGACCGCGTA  >  NC_002947/4485745‑4485889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.