| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4568531 = | 53 (1.020) | 4 (0.080) | 4/260 | NT | 7.8% | coding (461/2070 nt) | malQ | 4‑alpha‑glucanotransferase |
| ? | NC_002947 | 4568595 = | 43 (0.850) | coding (525/2070 nt) | malQ | 4‑alpha‑glucanotransferase | |||||
GGTCGATGGCCGACAGGGCGTGAATCGGGCTGATAGCCAAGGCATCGGCGCCGCGCTCGGCGGCCGAGCGGGCCAACTGCTCCAGCGCCAGGCAGTCGCCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4568680‑4568531‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGCCATCGACCAGGAACACTACAGCCCCTACTCACCTTCCAGTCGCCTGCTGCTCAACACCCTGTATACCAGC > NC_002947/4568595‑4568742 GGTCGATGGCCGACAGGGCGTGAATCGGGCTGATAGCCAAGGCATCGGCGCCGCGCTCGGCGGCCGAGCGGGCCAACTGCTCCAGCGCCAGGCAGTCGCCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAGG > 6:210746/1‑149 GTCGATGGCCGAGAGGGCGTGAATCGGGCTGATTGCCAAGGCATCGGCGCCGCGCTCGGCGGCCGAGCGGGCCAACTGCTCCAGCGCCTGGCAGTCGCCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAG < 2:12025/147‑1 GTCGATGGCCGACAGGGCGTGAATCGGGCTGATAGCCAAGGCATCGGCGCCGCGCTCGGCGGCCGAGCGGGCCAACTGCTCCAGCGCCAGGCAGTCGCCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAGGC < 6:3186/149‑1 TCCAGCGCCAGGCAGTCGCCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAGGCGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGC > 5:250221/1‑148 CGCCAGGCAGTCGCCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAGGCGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGCCATCGA > 1:325462/1‑149 CCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAGGCGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGCCATCGACCAGGAACACTAC < 2:325462/149‑1 GGCGGCGCAGGCTGTACAGCTGCACTGCCAGGCGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGCCATCGACCAGGAACACTACAGCCCCTACTCACCTTCCA < 6:250221/149‑1 GGCGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGCCATCGACCAGGAACACTACAGCCCCTACTCACCTTCCAGTCGCCTGCTGCTCAACACCCTGTATACCA > 2:111317/1‑149 CGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGCCATCGACCAGGAACACTACAGCCCCTACTCACCTTCCAGTCGCCTGCTGCTCAACACCCTGTATACCAGC < 8:163936/149‑1 GGTCGATGGCCGACAGGGCGTGAATCGGGCTGATAGCCAAGGCATCGGCGCCGCGCTCGGCGGCCGAGCGGGCCAACTGCTCCAGCGCCAGGCAGTCGCCGAAGCCCCCATCGCCGGGGCGGCGCAGGCTGTACAGCTGCACTGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4568680‑4568531‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcGCTGGAGCAGTTGGCCCGCTCGGCCGCCGAGCGCGGCGCCGATGCCTTGGCTATCAGCCCGATTCACGCCCTGTCGGCCATCGACCAGGAACACTACAGCCCCTACTCACCTTCCAGTCGCCTGCTGCTCAACACCCTGTATACCAGC > NC_002947/4568595‑4568742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |