| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4770978 = | 60 (1.150) | 3 (0.060) | 3/252 | NT | 5.4% | coding (8289/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4771025 = | 48 (0.970) | coding (8242/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
ACTCCGGCGTCGCGCTGCTGGTGTCGCAGACCGCGGCCCTGGCGGGCCTGCCGAAATTGGCCAACGTGCATGCCTTGAACCTGGACAGTTTCGACCCCACGCAGTGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4771129‑4770978‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGACGCCGGAGTCTTCCATCAGGTAACTCAGGCGCTCGGCGGGGTACGCCGTGT > NC_002947/4771025‑4771171 ACTCCGGCGTCGCGCTGCTGGTGTCGCAGACCGCGGCCCTGGCGGGCCTGCCGAAATTGGCCAACGTGCATGCCTTGAACCTGGACAGTTTCGACCCCACGCAGTGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTG < 4:179450/149‑1 CTCCGGCGTCGCGCTGCTGGTGTCGCAGACCGCGGCCCTGGCGGGCCTGCCGAAATTGGCCAACGTGCATGCCTTGAACCTGGACAGTTTCGACCCCACGCAGTGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGG < 1:234229/149‑1 TCCGGCGTCGCGCTGCTGGTGTCGCAGACCGCGGCCCTGGCGGGCCTGCCGAAATTGGCCAACGTGCATGCCTTGAACCTGGACAGTTTCGACCCCACGCAGTGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGGC > 3:155751/1‑149 GCGTCGCGCTGCTGGTGTCGCAGACCGCGGCCCTGGCGGGCCTGCCGAAATTGGCCAACGTGCATGCCTTGAACCTGGACAGTTTCGACCCCACGCAGTGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGGCCcac < 3:251364/149‑4 CGCAGTGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGGCCACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGA > 6:53330/1‑149 TGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGGCCACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGACGCCG > 3:148016/1‑149 GCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGGCCACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGACGCCG > 2:214436/1‑147 CCTGGCCACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGACGCCGGAGTCTTCCATC > 7:300035/1‑120 CCTGGCCACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGACGCCGGAGTCTTCCATC < 8:300035/120‑1 CCACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGACGCCGGAGTCTTCCATCAGGTAACTCAGGCGCTCGGCGGGGTACGCCGTGT < 1:13905/149‑1 ACTCCGGCGTCGCGCTGCTGGTGTCGCAGACCGCGGCCCTGGCGGGCCTGCCGAAATTGGCCAACGTGCATGCCTTGAACCTGGACAGTTTCGACCCCACGCAGTGGCCAGGCCATGCACCCCAGGTAACGCTGCAGGGTGAGAACCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4771129‑4770978‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccACTGCGTGGGGTCGAAACTGTCCAGGTTCAAGGCATGCACGTTGGCCAATTTCGGCAGGCCCGCCAGGGCCGCGGTCTGCGACACCAGCAGCGCGACGCCGGAGTCTTCCATCAGGTAACTCAGGCGCTCGGCGGGGTACGCCGTGT > NC_002947/4771025‑4771171 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |