| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4810285 = | 65 (1.250) | 5 (0.100) | 5/254 | NT | 7.7% | coding (125/837 nt) | PP_4236 | thiol:disulfide interchange protein DsbE |
| ? | NC_002947 | 4810333 = | 57 (1.150) | coding (173/837 nt) | PP_4236 | thiol:disulfide interchange protein DsbE | |||||
AGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATCAGGAACAGGTTGAACAGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4810438‑4810285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCC > NC_002947/4810333‑4810479 AGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATCAGGAACAGGTTGAACAG > 7:45068/1‑149 CCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATCAGGAACAGGTTGAACAGCGCCGGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTT > 1:215109/1‑139 CCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATCAGGAACAGGTTGAACAGCGCCGGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTT < 2:215109/139‑1 CAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATCAGGAACAGGTTGAACAGCGCCGATTCCGGGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCC > 5:272075/1‑149 GAAGCCGGCGCGGGCACACAGCAGGCCGATCAGGAACAGGTTGAACAGCGCCGGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCAGGTCGGGCCTTGCCG > 6:69860/1‑149 GATCAGGAACAGGTTGAACAGCGCCGATTCCGGGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGG < 6:272075/149‑1 GCGCCGGCTTCGTGGTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATC > 7:143474/1‑107 GCGCCGGCTTCGTGGTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATC < 8:143474/107‑1 GCCGGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCG < 5:300066/149‑1 CGGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCC < 5:272808/149‑1 CGGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCC < 8:245463/149‑1 AGCACGATGCCGGCAAGGCCCGACCAGAACAGGAAGCCGCCGTCACGGATGTCGATGATTTGCAGCGGGTCGTCCTGATACATCGGCCAGTAGGCCAGCACGAAGCCGGCGCGGGCACACAGCAGGCCGATCAGGAACAGGTTGAACAGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4810438‑4810285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgGCTTCGTGCTGGCCTACTGGCCGATGTATCAGGACGACCCGCTGCAAATCATCGACATCCGTGACGGCGGCTTCCTGTTCTGGTCGGGCCTTGCCGGCATCGTGCTCGGAGCCCTCTGGCAGGGCTGGCGCCACCCCGGCCTGCGCC > NC_002947/4810333‑4810479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |