| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4907490 | 82 (1.580) | 5 (0.100) | 5/248 | NT | 6.2% | coding (299/939 nt) | PP_4316 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| ? | NC_002947 | = 4907516 | 75 (1.550) | coding (273/939 nt) | PP_4316 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
CGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCATCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACG‑‑G‑CCGCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4907341‑4907490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcggcatAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGGCCGTCGCCGACCACACCCTGGCCCTGCTGCTGGCGCTGCTGCGCGACATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGAATGGAACCGGGTTATCAGCCCCTCGGT < NC_002947/4907516‑4907373 CGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCATCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACG‑‑G‑CCGCGGCA < 8:23343/149‑1 TTGCCACTCGCCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCATCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACG‑‑G‑CCGCGGCATAACCGTCACCAATGGCGCCGGG > 5:126113/1‑149 CGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCATCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACG‑‑G‑CCGCGGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGC < 6:126113/149‑1 TAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCATCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGCCGCCGCCGCTGCCCGCGGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGGCCGTCG < 5:166615/149‑1 ACCCGGTTCCATTCACCGCGTCGCGTGCTGGCATCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACG‑‑G‑CCGCGGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGG < 6:126241/138‑1 ACCCGGTTACATTCACCGCGTCGAGTGATGGCATCGCCGCGGGGGATCTCGCGCACAAGCGCAAGCAGCAGGGCCAGGGTGTGGTCGGCGACG‑‑G‑CCGCGGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGG > 5:126241/1‑138 GCGGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGGCCGTCGCCGACCACACCCTGGCCCTGCTGCTGGCGCTGCTGCGCGACATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGAATGGAACCGGGTTATCAGCCCCTCG < 6:17140/149‑1 GCGGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGGCCGTCGCCGACCACACCCTGGCCCTGCTGCTGGCGCTGCTGCGCGACATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGAATGGAACCGGGTTATCAGCCCCTCG > 6:213486/1‑149 GGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGGCCGTCGCCGACCACACCCTGGCCCTGCTGCTGGCGCTGCTGCGCGACATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGAATGGAACCGGGTTATCAGCCCCTCGGT < 4:11432/149‑1 GGCATAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGGCCGTCGCCGACCACACCCTGGCCCTGCTGCTGGCGCTGCTGCGCGACATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGAATGGAACCGGGTTATCAGCCCCTCGGT < 8:140/149‑1 CGAGGCCGAGAATGCCCAGGCGCTTGCCACTCACCGAGGGGCTGATAACCCGGTTCCATTCACCGCGCCGCGTGCTGGCATCGGCGCGGGGGATGTCGCGCAGCAGCGCCAGCAGCAGGGCCAGGGTGTGGTCGGCGACG‑‑G‑CCGCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4907341‑4907490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcggcatAACCGTCACCAATGGCGCCGGGGCCAATGCCGCGGCCGTCGCCGACCACACCCTGGCCCTGCTGCTGGCGCTGCTGCGCGACATCCCCCGCGCCGATGCCAGCACGCGGCGCGGTGAATGGAACCGGGTTATCAGCCCCTCGGT < NC_002947/4907516‑4907373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |