| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5298943 | 52 (1.000) | 3 (0.060) | 3/252 | NT | 5.3% | coding (1159/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease |
| ? | NC_002947 | = 5298974 | 57 (1.160) | coding (1128/2076 nt) | recD | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease | |||||
CTGCCTTCACCGAAACGCCGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5298837‑5298943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcgccGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCAGGTGGTGATGCTGCGTTTTTCACGGCGTTTCGGTGAAGGCAGCGGTATTGGC < NC_002947/5298974‑5298827 CTGCCTTCACCGAAACGCCGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCT < 6:286917/149‑1 CCTTCACCGAAACGCCGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGC > 5:124893/1‑145 CCTTCACCGAAACGCCGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGC < 6:124893/145‑1 GCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCAGGTGGTGATGCTGCGTTTTTCACGGCGTTTCGGTGAAGGCAGCGGTATTG < 3:7396/149‑1 GCCGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCAGGTGGTGATGCTGCGTTTTTCACGGCGTTTCGGTGAAGGCAGCGGTATTG < 8:218985/149‑1 CGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCAGGTGGTGATGCTGCGTTTTTCACGGCGTTTCGGTGAAGGCAGCGGTATTGGC < 6:144979/149‑1 CTGCCTTCACCGAAACGCCGTGAAAAACGCAGCATCACCACCTGCTGGGCCAGCGGGTGACGCTGCTCATCGCCGGCCTTAAGGCCACTGCCGGCCAGCGACTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5298837‑5298943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcgccGGCGACTGCAGCGTGGCTTCAGCAGGTCAGTGGCGAGTCGCTGGCCGGCAGTGGCCTTAAGGCCGGCGATGAGCAGCGTCACCCGCTGGCCCAGCAGGTGGTGATGCTGCGTTTTTCACGGCGTTTCGGTGAAGGCAGCGGTATTGGC < NC_002947/5298974‑5298827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |