| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5301233 = | 65 (1.250) | 4 (0.080) | 4/254 | NT | 5.9% | coding (2540/3675 nt) | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease |
| ? | NC_002947 | 5301281 = | 65 (1.310) | coding (2492/3675 nt) | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease | |||||
AGGTAACGCTCACCTCACCCTCACACCCGACCAGGAGCAGATCGAGCGCGCTGACGACGAGCGCCTGGCCGAAGACCTGCGCCTGCTCTACGTGGCCCTGACCCGCGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5301382‑5301233‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggGTCAGGGCCACGTAGAGCAGGCGCAGGTCTTCGGCCAGGCGCTCGTCGTCAGCGCGCTCGATCTGCTCCTGGTCGGGTGTGAGGGTGAGGTGAGCGTTACCTTCGCTGTCATGCCAGGCCAGCGGCAGACGGCTACCATCCACCGGTT > NC_002947/5301281‑5301428 AGGTAACGCTCACCTCACCCTCACACCCGACCAGGAGCAGATCGAGCGCGCTGACGACGAGCGCCTGGCCGAAGACCTGCGCCTGCTCTACGTGGCCCTGACCCGCGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCG < 2:309506/149‑1 GGAGCAGATCGAGCGCGCTGACGACGAGCGCCTGGCCGAAGACCTGCGCCTGCTCTACGTGGCCCTGACCCGCGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCG < 6:177329/116‑1 CCTGACCCGCGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCGGGTCAGGGCCACGTAGAGCAGGCGCAGGTCTTCGGCCAGGCGCTCGTCGTCAGCGCGCTCGATCTGCTCCTGGTCGGGTGTGAGGGTGAGGTGAGC > 8:260451/1‑149 CCCGCGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCGGGTCAGGGCCACGTAGAGCAGGCGCAGGTCTTCGGCCAGGCGCTCGTCGTCAGCGCGCTCGATCTGCTCCTGGTCGGGTGTGAGGGTGAGGTGAGCGTTAC > 2:83187/1‑149 CCGCGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCGGGTCAGGGCCACGTAGAGCAGGCGCAGGTCTTCGGCCAGGCGCTCGTCGTCAGCGCGCTCGATCTGCTCCTGGTCGGGTGTGAGGGTGACGTGAGCGTTACC < 7:260451/149‑1 CGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCGGGTCAGGGCCACGTAGAGCAGGCGCAGGTCTTCGGCCAGGCGCTCGTCGTCAGCGCGCTCGATCTGCTCCTGGTCGGGTGTGAGGGTGAGGTGAGCGTTACCTTC < 1:83187/149‑1 GGTCAGGGCCACGTAGAGCAGGCGCAGGTCTTCGGCCAGGCGCTCGTCGTCAGCGCGCTCGATCTGCTCCTGGTCGGGTGTGAGGGTGAGGTGAGCGTTACCTTCGCTGTCATGCCAGGCCAGCGGCAGACGGCTACCATCCACCGGTT < 3:39368/149‑1 AGGTAACGCTCACCTCACCCTCACACCCGACCAGGAGCAGATCGAGCGCGCTGACGACGAGCGCCTGGCCGAAGACCTGCGCCTGCTCTACGTGGCCCTGACCCGCGCCCAGCATGCTTGCTGGCTGGGTGTCGCCGACCTCAAGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5301382‑5301233‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggGTCAGGGCCACGTAGAGCAGGCGCAGGTCTTCGGCCAGGCGCTCGTCGTCAGCGCGCTCGATCTGCTCCTGGTCGGGTGTGAGGGTGAGGTGAGCGTTACCTTCGCTGTCATGCCAGGCCAGCGGCAGACGGCTACCATCCACCGGTT > NC_002947/5301281‑5301428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |