New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5380510	50 (0.960)	3 (0.060)	3/256	NT	5.5%	coding (92/405 nt)	fur	ferric iron uptake global transcriptional repressor Fur
	?	NC_002947	= 5380557	55 (1.100)					coding (45/405 nt)	fur	ferric iron uptake global transcriptional repressor Fur

CCAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5380358‑5380510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGAGTGCAGAGGATGTCTACAAGGCGCTGATGGAGGCTGGCGAGGATGTAGGCCTGGCCACCGTCTATCGCGTGCTGACCCAGTTCGAGGCGGCG  <  NC_002947/5380557‑5380410                                                                                                                                                                                                                                                                                                               CCAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATG                                                                                                                                                          >  3:55899/1‑149  CAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGT                                                                                                                                                         <  8:98873/149‑1                                                           CTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACAT                                                                                                <  2:285398/149‑1                                                                         GCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGA                                                                                              >  1:49807/1‑137                                                                         GCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGACCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGA                                                                                              <  2:49807/137‑1                                                                                                                                                         CCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGAGTGCAGAGGATGTCTACAAGGCGCTGATGGAGGCTGGCGAGGATGTAGGCCTGGCCACCGTCTATCGCGTGCTGACCCAGTTCGAGGCGGCG  <  3:283124/149‑1                                                                                                                                                                                                                                                                                                               CCAGCTCGAACACTGCATGACCGCCGTCGAAGTTGTGGCGAACCACCAGACCCGCCGCCTCGAACTGGGTCAGCACGCGATAGACGGTGGCCAGGCCTACATCCTCGCCAGCCTCCATCAGCGCCTTGTAGACATCCTCTGCACTCATGTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5380358‑5380510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgacCCTGCCTCGAGTCAAGATCCTTCAGATGCTCGACTCTACCGAGCAGCGTCACATGAGTGCAGAGGATGTCTACAAGGCGCTGATGGAGGCTGGCGAGGATGTAGGCCTGGCCACCGTCTATCGCGTGCTGACCCAGTTCGAGGCGGCG  <  NC_002947/5380557‑5380410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.