New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 547679061 (1.170)4 (0.080) 3/258 NT 6.6% coding (1020/1317 nt) PP_4813 PAP2 family protein/DedA family protein
?NC_002947 = 5476814 54 (1.070)coding (1044/1317 nt) PP_4813 PAP2 family protein/DedA family protein

GATGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5476640‑5476790
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGT  <  NC_002947/5476814‑5476667
                                                                                                                                                                                                                                                                                                           
GATGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGG                                                                                                                                                        >  3:137394/1‑149
 ATGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGG                                                                                                                                                        <  8:252106/148‑1
                               AAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGTCGCATGCGTGGTGGCTGCCCACGCCCCGCCA                                                                                                                         <  6:149288/149‑1
                                    GCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGTCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTAC                                                                                                                     <  6:115404/148‑1
                                                                              GACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCGCATGCGTGGTGGCTGCCCACGCCCCGCCA                                                                                                                         >  1:237622/1‑102
                                                                              GACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCGCATGCGTGGTGGCTGCCCACGCCCCGCCA                                                                                                                         <  2:237622/102‑1
                                                                                                                                                   GGCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTC     <  5:197134/149‑1
                                                                                                                                                    GCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCA    <  6:60443/149‑1
                                                                                                                                                    GCGCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGT                                                  <  6:306345/103‑1
                                                                                                                                                      GCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGT  <  1:222994/149‑1
                                                                                                                                                      GCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGT  <  1:60174/149‑1
                                                                                                                                                      GCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGT  <  7:161264/149‑1
                                                                                                                                                                                                                                                                                                           
GATGGGCACGGCGATCGCCAACGGCACACTGAAATGGCTATTTGCCCGGGCCAGGCCGGAAGTACTGACCGACCCACTGACCAGCTACAGCATGCCCAGCGGGCACAGCTCGGCATCGTTCGCGTTCTTCCTGGTCATGGCCGTACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5476640‑5476790
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCATGCGTGGTGGCTGCCCACGCCCCGCCAGTACGGCCATGACCAGGAAGAACGCGAACGATGCCGAGCTGTGCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGT  <  NC_002947/5476814‑5476667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.