New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5545666	NA (NA)	46 (0.900)	42/260	NT	100%	intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5621244 =	0 (0.000)					coding (20/774 nt)	PP_4939	hypothetical protein

CGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATctc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5545519‑5545666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGC  >  NC_002947/5621244‑5621389                                                                                                                                                                                                                                                                                                          CGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATC                                                                                                                                                    <  3:173151/149‑1 CGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATC                                                                                                                                                    <  3:129134/149‑1  GCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCT                                                                                                                                                   <  1:25853/149‑1   CATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                  <  5:213935/149‑1   CATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                  >  6:136274/1‑149    ATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCT                                                                                                                                                 >  8:7894/1‑149    ATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCT                                                                                                                                                 >  3:27882/1‑149     TTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTC                                                                                                                                                <  5:56504/149‑1     TTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTC                                                                                                                                                <  2:105049/149‑1     TTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTC                                                                                                                                                <  7:184630/149‑1      TGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTC                                                                                                                                                <  4:269350/148‑1      TGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTC                                                                                                                                                >  3:269350/1‑148       GGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCA                                                                                                                                               <  1:301194/148‑1       GGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCA                                                                                                                                               <  4:250140/148‑1       GGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCA                                                                                                                                               <  7:81161/148‑1        GGAACGATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCAT                                                                                                                                              >  5:68497/1‑148        GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCAT                                                                                                                                              <  8:259798/148‑1        GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCAT                                                                                                                                              <  7:182399/148‑1        GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCAT                                                                                                                                              >  7:206097/1‑148        GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCAT                                                                                                                                              <  1:164250/148‑1        GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCAT                                                                                                                                              >  7:56832/1‑148        GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCA                                                                                                                                               >  6:142206/1‑147        GGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCA                                                                                                                                               >  7:241803/1‑147         GAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATag                                                                                                                                            <  7:7894/149‑3         GAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTT                                                                                                                                            <  7:140985/149‑1             CATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAA                                                                                                                                         >  2:17785/1‑148                       TATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCG                                                                                                                               >  7:233435/1‑148                           CGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCACGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTC                                                                                                                          >  2:218584/1‑149                                GCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGTTGTTCTCTCATTTGAAAAGCGCACCGGATTCCCTCC                                                                                                                     <  7:148194/149‑1                                    ACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑A                                                                                                                 <  2:179999/148‑1                                    ACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTC                                                                                                                                                >  5:183373/1‑118                                    ACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTC                                                                                                                                                <  6:183373/118‑1                                     gCTACCCGGATCAGTCGGCGAATGCTTTTCTTGATCTCGCTGTCCGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACTGCGCAGCCCGGAAGGGCTGGGTTATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑AT                                                                                                                <  8:149597/147‑1                                      CTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTA                                                                                                              >  8:269905/1‑149                                        ACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTAC                                                                                                             >  3:172915/1‑148                                         CCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGA                                                                                                           <  1:17785/149‑1                                          CCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAAGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACG                                                                                                            >  1:67400/1‑148                                            GGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCACGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTA                                                                                                        <  1:218584/149‑1                                                 AGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGC                                                                                                   <  8:233435/149‑1                                                  GTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCG                                                                                                                    <  2:126079/132‑1                                                  GTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCG                                                                                                                    >  1:126079/1‑132                                                     GGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTT                                                                                                <  7:51524/148‑1                                                     GGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTT                                                                                                >  2:184830/1‑148                                                       CGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACTTCATGCGCATCATGTTTGCTGTGCTACAGCGCAGCCCGTAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTAAGACTATCGGCCTTCAA                                                                                             <  4:77241/149‑1                                                         AATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCACTCCGC‑ATTACGACTATCGGCCTTCAAC                                                                                            >  5:127930/1‑148                                                             CTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACC                                                                                        <  7:269905/148‑1                                                              TTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCG                                                                                      >  5:304229/1‑149                                                                TTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                  <  2:106226/88‑1                                                                TTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                  >  1:106226/1‑88                                                                     GATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGG                                                                               <  1:184830/149‑1                                                                     GATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGG                                                                               >  2:17152/1‑149                                                                     GATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCT                                                                                 <  3:285884/147‑1                                                                         TCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGT                                                                           >  6:325007/1‑149                                                                           cATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGA                                                                         <  4:37186/148‑1                                                                               TCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGC                                                                     <  1:17152/149‑1                                                                                 AGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTa                                                                   >  1:115762/1‑148                                                                                 AGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTC                                                                   >  4:62620/1‑149                                                                                   TGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTT                                                                 >  5:221243/1‑149                                                                                   TGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTT                                                                 >  4:61926/1‑149                                                                                     C‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGT                                                               >  3:6402/1‑149                                                                                     C‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGT                                                               >  3:1883/1‑149                                                                                          TCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTA                                                            <  5:244780/148‑1                                                                                              ACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGC                                                       >  5:165930/1‑149                                                                                              ACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGA                                                          <  2:67400/146‑1                                                                                              ACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCAC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGC                                                       >  6:22402/1‑149                                                                                               CGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCAC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCC                                                      <  5:22402/149‑1                                                                                                             TGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTG                                                                                <  4:316412/109‑1                                                                                                             TGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTG                                                                                >  3:316412/1‑109                                                                                                                     GTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGC                                >  7:216919/1‑149                                                                                                                         GACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATT                                                                                                               >  6:150110/1‑66                                                                                                                         GACAGCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATT                                                                                                               <  5:150110/66‑1                                                                                                                             GCGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGA                        <  3:302058/149‑1                                                                                                                              CGCAGCCCGGAAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGA                        >  5:194406/1‑148                                                                                                                                        AAGGGCTGGGTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGT             <  3:62620/149‑1                                                                                                                                                 GTGATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGA    <  6:304229/149‑1                                                                                                                                                    ATCTCTCATTTGAAAAGCGCACCGGATTCCCTCCGCGATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGC  >  1:53087/1‑149                                                                                                                                                                                                                                                                                                          CGCATTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGC‑AGATCTGACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATctc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5545519‑5545666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCTCATTTGAAAAGCGCACCGGATTCCCTCCGC‑ATTACGACTATCGGCCTTCAACAACCCGCTCCTGGGCGTGAAAGCTCTTGTTTAGATGCCCAGCTTCAGACGCAGCCGCTGCCATGCAGACAATGGCGGGTGGGGCCTGAGC  >  NC_002947/5621244‑5621389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.