| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5546722 | 52 (1.000) | 5 (0.100) | 5/252 | NT | 9.2% | coding (2332/2574 nt) | rnr | exoribonuclease R |
| ? | NC_002947 | = 5546773 | 49 (0.990) | coding (2281/2574 nt) | rnr | exoribonuclease R | |||||
CGATTTGCTGCCAGCACTGCTGCGCGCGTCGGTCATCAGCGCTTTTTTCATCTCGCGGCTTTTACGCACTTCTGCGTTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5546573‑5546722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGCCCAAGCCGCGCAGCCGCAAAAGCGAAGCGTCCGAAGCGTACTTCCCCAAGGATGCTGTGCAGCGTAACGCAGAAGTGCGTAAAAGCCGC < NC_002947/5546773‑5546627 CGATTTGCTGCCAGCACTGCTGCGCGCGTCGGTCATCAGCGCTTTTTTCATCTCGCGGCTTTTACGCACTTCTGCGTTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGG < 2:172769/149‑1CGATTTGCTGCCAGCACTGCTGCGCGCGTCGGTCATCAGCGCTTTTTTCATCTCGCGGCTTTTACGCACTTCTGCGTTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGG > 3:281252/1‑149 CTCGCGGCTTTTACGCACTTCTGCGTTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGGCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGA > 7:6714/1‑148 CGGCTTTTACGCACTTCTGCGTTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGGCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCC < 8:6714/149‑1 TACGCACTTCTGCGTTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGGCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGCCC < 5:326728/148‑1 TTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGGCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGC > 1:250588/1‑132 TTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGGCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGC < 2:250588/132‑1 GCGTGGCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGCCCAAGCCGCGCAGCCGCAAAAGCGAAGCGTCCGAAGCGTACTTCCCCAAGGATGCTGTGCAGCGTAACGCAGAAGTGCGTAAAA < 6:132781/149‑1 GCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGCCCAAGCCGCGCAGCCGCAAAAGCGAAGCGTCCGAAGCGTACTTCCCCAAGGATGCTGTGCAGCGTAACGCAGAAGTGCGTAAAAGCCGC < 1:262637/149‑1 GCGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGCCCAAGCCGCGCAGCCGCAAAAGCGAAGCGTCCGAAGCGTACTTCCCCAAGGATGCTGTGCAGCGTAACGCAGAAGTGCGTAAAAGCCGC < 5:96611/149‑1 CGATTTGCTGCCAGCACTGCTGCGCGCGTCGGTCATCAGCGCTTTTTTCATCTCGCGGCTTTTACGCACTTCTGCGTTACGCTGCACAGCATCCTTGGGGAAGTACGCTTCGGACGCTTCGCTTTTGCGGCTGCGCGGCTTGGGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5546573‑5546722‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcGCCGCACCGGTTGCTGAAAAAGCCGAGCAGCAGCCGGCAACCGAAGCGAAAGCCACGCCCAAGCCGCGCAGCCGCAAAAGCGAAGCGTCCGAAGCGTACTTCCCCAAGGATGCTGTGCAGCGTAACGCAGAAGTGCGTAAAAGCCGC < NC_002947/5546773‑5546627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |