New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5619774	75 (1.440)	3 (0.060)	3/252	NT	4.0%	coding (727/1140 nt)	PP_4938	glycosyl transferase
	?	NC_002947	= 5619802	73 (1.480)					coding (699/1140 nt)	PP_4938	glycosyl transferase
Rejected: Frequency below/above cutoff threshold.

GGAACGCGAAGGTACCAATAGCCAGTCGAATGCTCGATACAGCTGCTGCAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5619622‑5619774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagGGCCAGTGCACGGCAACCGGGCTTGCAGCTGGCGATCATTGGCGAGGGGCCGCAGCATGCCGTGCTGCAGCAGCGTATCGACGCGTTGGGCCTGGCCGAGCGCGTTCATCTGCGCGGTCACCGCGAAGACCTGCAGCAGCTGTATCGA  <  NC_002947/5619802‑5619655                                                                                                                                                                                                                                                                                                               GGAACGCGAAGGTACCAATAGCCAGTCGAATGCTCGATACAGCTGCTGCAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATC                                                                                                                                                           <  2:274882/148‑1  GAACGCGAAGGTACCAATAGCCAGTCGAATGCTCGATACAGCTGCTGCAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATCGC                                                                                                                                                         >  2:121733/1‑149     CGCGAAGGTACCAATAGCCAGTCGAATGCTCGATACAGCTGCTGCAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATCGCCAG                                                                                                                                                      >  1:291461/1‑149                                     ATACAGCTGCTGCAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATCGCCAGGGCCAGTGCACGGCAACCGGGCTTGCAGCTGG                                                                                                                      <  8:85708/149‑1                                              CTGCAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATCGCCAGGGCCAGTGCACGGCAACCGGGCTTGCAGCTGGCGATCATT                                                                                                              <  8:262242/148‑1                                                 CAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATCGCCAGGGCCAGTGCACGGCAACCGGGCTTGCAGCTGGCGATCATTGG                                                                                                            <  4:165453/147‑1                                                                                                                                                         GGGCCAGTGCACGGCAACCGGGCTTGCAGCTGGCGATCATTGGCGAGGGGCCGCAGCATGCCGTGCTGCAGCAGCGTATCGACGCGTTGGGCCTGGCCGAGCGCGTTCATCTGCGCGGTCACCGCGAAGACCTGCAGCAGCTGTATCGA  <  7:161876/149‑1                                                                                                                                                                                                                                                                                                               GGAACGCGAAGGTACCAATAGCCAGTCGAATGCTCGATACAGCTGCTGCAGGTCTTCGCGGTGACCGCGCAGATGAACGCGCTCGGCCAGGCCCAACGCGTCGATACGCTGCTGCAGCACGGCATGCTGCGGCCCCTCGCCAATGATCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5619622‑5619774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagGGCCAGTGCACGGCAACCGGGCTTGCAGCTGGCGATCATTGGCGAGGGGCCGCAGCATGCCGTGCTGCAGCAGCGTATCGACGCGTTGGGCCTGGCCGAGCGCGTTCATCTGCGCGGTCACCGCGAAGACCTGCAGCAGCTGTATCGA  <  NC_002947/5619802‑5619655

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.