| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5634082 = | 76 (1.460) | 5 (0.100) | 5/256 | NT | 6.5% | coding (3612/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| ? | NC_002947 | 5634113 = | 70 (1.400) | coding (3643/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase | |||||
TCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCTTGCCCGGTTCACCGTCAACCCACACCGCCGAGCTGCCAACGGCCAGTACCGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5634230‑5634082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGC > NC_002947/5634113‑5634257 TCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCTTGCCCGGTTCACCGTCAACCGACACCGCCGAGCTGCCAACGGCCAGTACCGCGGCG < 4:311782/149‑1TCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCTTGCCCGGTTCACCGTCAACCCACACCGCCGAGCTGCCAACGGCCAGTACCGCGGC > 6:315550/1‑148 CCCACACCGCCGAGCTGCCAACGGCCAGTACCGCGGCGGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGAC > 3:84549/1‑149 CCACACCGCCGAGCTGCCAACGGCCAGTACCGCGGCGGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGG > 1:32680/1‑124 CCACACCGCCGAGCTGCCAACGGCCAGTACCGCGGCGGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGG < 2:32680/124‑1 ACCGCCGAGCTGCCAACGGCCAGTACCGCGGCGGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGT > 5:194784/1‑149 CCAACGGCCAGTACCGCGGCGGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGG < 4:84549/149‑1 GGCGGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGC > 1:117104/1‑149 TCACGGCGTCGAACGCCACTTCATCCTTGTTCCAGTCCGCGACCAGCTTCACCTTGGCCTGCAGCTCACGCGGCAGGCGGGCGCGCAGGGCCTTGCCCGGTTCACCGTCAACCCACACCGCCGAGCTGCCAACGGCCAGTACCGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5634230‑5634082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgGTGTGGGTTGACGGTGAACCGGGCAAGGCCCTGCGCGCCCGCCTGCCGCGTGAGCTGCAGGCCAAGGTGAAGCTGGTCGCGGACTGGAACAAGGATGAAGTGGCGTTCGACGCCGTGATCCACCATGGCGACTCGGACCAGCTGC > NC_002947/5634113‑5634257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |