New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6076320 = | 55 (1.060) | 7 (0.140) | 7/250 | NT | 12.7% | coding (242/2289 nt) | PP_5328 | phosphate ABC transporter permease |
? | NC_002947 | 6076357 = | 45 (0.920) | coding (205/2289 nt) | PP_5328 | phosphate ABC transporter permease |
GCATGCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6076473‑6076320 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggaACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTATTG > NC_002947/6076357‑6076502 GCATGCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCC < 6:206185/149‑1 GTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGT > 7:74459/1‑149 CCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAG > 7:36780/1‑120 CCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAG < 8:36780/120‑1 TTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTT < 3:91762/141‑1 TTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTT > 4:91762/1‑141 GGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATG > 8:296859/1‑149 ACCAGCAAGAACCCCCTGGAACAGGGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCG < 8:74459/147‑1 GCCCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCG > 8:105496/1‑149 CCTGGAACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTA < 7:105496/149‑1 GAACAGTGGCAGTACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTATTG > 6:141444/1‑148 GCATGCGCGCCCTCAAGGACCGCCTGACCCGCTGGTATGTGCTGGTAGGCGGGCTTGCCGTATTGGCGGCAATCACGTTGATCTTCTTCTACCTGGCTTATGTGGTGCTGCCACTGTTCCAGGGCGCCGAGCTGACCAGCAAGAAAGCCCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6076473‑6076320 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctggaACAGTGGCAGCACCACATAAGCCAGGTAGAAGAAGATCAACGTGATTGCCGCCAATACGGCAAGCCCGCCTACCAGCACATACCAGCGGGTCAGGCGGTCCTTGAGGGCGCGCATGCGGCGCTTGCGTTGCAACTCGGGCGTATTG > NC_002947/6076357‑6076502 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |