New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 251034	65 (1.250)	4 (0.080)	4/256	NT	6.1%	coding (169/1347 nt)	nfeD	membrane bound peptidase NefD
	?	NC_002947	= 251061	61 (1.220)					coding (142/1347 nt)	nfeD	membrane bound peptidase NefD

GGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCA  >  NC_002947/250891‑251181                                                                                                                                                |                                                                                                                                                    ggTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCtt                                                                                                                                                <  7:294542/149‑1 (MQ=255) ggTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCt                                                                                                                                                 <  3:212461/148‑1 (MQ=255)  gTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCagcctc                                                                                                                                               >  7:184062‑M1/1‑143 (MQ=255)     ccGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTgcgc                                                                                                                                            >  8:8752/1‑149 (MQ=255)     ccGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTgcgc                                                                                                                                            >  6:59692/1‑149 (MQ=255)       ggCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcct                                                                                                                                          >  3:171008/1‑149 (MQ=255)          gcTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctggg                                                                                                                                       >  5:102119/1‑149 (MQ=255)            tGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgggcc                                                                                                                                     >  3:44637/1‑149 (MQ=255)            tGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgggcc                                                                                                                                     >  8:34927/1‑149 (MQ=255)              gcggcgCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCgcctgggcctg                                                                                                                                   <  2:6249/149‑1 (MQ=255)                   gcgGGCGCCGCTGGGGGCTACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCTCCTTGCGCCTGGGCCTGGCCGa                                                                                                                              <  2:267860/149‑1 (MQ=255)                         gccgcTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTgc                                                                                                                        >  2:3954‑M2/1‑147 (MQ=255)                           cggcgggggcaacGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCagcctcggccaggcccaggcgcaaggcgcgc                                                                                                                      <  5:12139‑M1/145‑32 (MQ=255)                           cgcTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGcc                                                                                                                                <  5:15687/139‑1 (MQ=255)                           cgcTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGcc                                                                                                                                >  6:15687/1‑139 (MQ=255)                                ggggCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCagcctcggccaggcccaggcgcaaggcgcgcaac                                                                                                                   <  8:184062‑M1/147‑35 (MQ=255)                                ggggCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAg                                                                                                                 <  8:273126/149‑1 (MQ=255)                                 gggCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCagcctcggccaggcccaggcgcaaggcgcgcaactgg                                                                                                                <  3:286881‑M1/149‑38 (MQ=255)                                 gggCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAgg                                                                                                                <  7:8752/149‑1 (MQ=255)                                    cAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAg                                                                                                             >  7:54726/1‑149 (MQ=255)                                    cAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAg                                                                                                             >  3:212669/1‑149 (MQ=255)                                          aGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCAc                                                                                                                    >  6:139200/1‑136 (MQ=255)                                             tGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTc                                                                                                           >  3:119224/1‑142 (MQ=255)                                             tGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTc                                                                                                           <  4:119224/142‑1 (MQ=255)                                             tGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTg                                                                                                    >  8:27731/1‑149 (MQ=255)                                                    gggTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTggccgggc                                                                                             <  6:21428/149‑1 (MQ=255)                                                     ggTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTggccgggcc                                                                                            <  5:141925/149‑1 (MQ=255)                                                      gTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAAGCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTggccgggccg                                                                                           <  3:91717/149‑1 (MQ=255)                                                          ggTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTgc                                                                                                                                              >  4:130217/1‑94 (MQ=255)                                                          ggTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTgc                                                                                                                                              <  3:130217/94‑1 (MQ=255)                                                          ggTGCTGGAGAGAATTGCCTTGATCATCAGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGAGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGACGGCGCTGGCCGGGCCGATgg                                                                                       >  1:181397/1‑149 (MQ=255)                                                               tGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGcgtcg                                                                                  >  2:137203/1‑149 (MQ=255)                                                                 gagagaATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGcgtcgt                                                                                 <  6:102119/148‑1 (MQ=255)                                                                       aTTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGtt                                                                          >  8:243221/1‑149 (MQ=255)                                                                            cTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAg                                                                       <  4:119438/147‑1 (MQ=255)                                                                            cTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAg                                                                       >  3:119438/1‑147 (MQ=255)                                                                               gATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCAcc                                                                   >  5:175804/1‑148 (MQ=255)                                                                                   atcTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCacac                                                              >  5:56216/1‑149 (MQ=255)                                                                                    tcTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCCCCCACAcc                                                             >  1:321721/1‑149 (MQ=255)                                                                                    tcTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACAcc                                                             >  2:209088/1‑149 (MQ=255)                                                                                     cTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGcgtcgt                                                                                 >  4:269066/1‑128 (MQ=255)                                                                                         cgcATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGcc                                                        <  6:28835/149‑1 (MQ=255)                                                                                                cACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGTTggc                                                                                                  >  1:147747/1‑100 (MQ=255)                                                                                                cACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGTTggc                                                                                                  <  2:147747/100‑1 (MQ=255)                                                                                                cACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGcc                                                        >  5:194604/1‑142 (MQ=255)                                                                                                cACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGcc                                                        <  6:194604/142‑1 (MQ=255)                                                                                                     tCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTg                                            >  3:164901/1‑149 (MQ=255)                                                                                                       cAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGc                                          >  3:186743/1‑149 (MQ=255)                                                                                                       cAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGc                                          >  3:139418/1‑149 (MQ=255)                                                                                                        aGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGc                                          >  7:103669/1‑148 (MQ=255)                                                                                                          cccgcccgGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGc                                                                      <  6:309014/118‑1 (MQ=255)                                                                                                          cccgcccgGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGc                                                                      >  5:309014/1‑118 (MQ=255)                                                                                                               ccgGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTg                                            >  1:235293/1‑139 (MQ=255)                                                                                                               ccgGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTg                                            <  2:235293/139‑1 (MQ=255)                                                                                                               ccgGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGc                                  >  5:164184/1‑149 (MQ=255)                                                                                                                cgGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCg                                 <  6:56216/149‑1 (MQ=255)                                                                                                                 ggggTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGt                                <  4:164901/149‑1 (MQ=255)                                                                                                                 ggggTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGt                                <  4:212669/149‑1 (MQ=255)                                                                                                                 ggggTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGt                                <  8:54726/149‑1 (MQ=255)                                                                                                                  gggTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTg                               <  4:44637/149‑1 (MQ=255)                                                                                                                   ggTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGACCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGa                              <  3:16337/149‑1 (MQ=255)                                                                                                                    gTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGAt                             <  5:59692/149‑1 (MQ=255)                                                                                                                       tCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGcc                          <  7:27731/149‑1 (MQ=255)                                                                                                                          aTGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAg                       <  7:34927/149‑1 (MQ=255)                                                                                                                          aTGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGACGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAg                       <  2:181397/149‑1 (MQ=255)                                                                                                                              ggATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGTCGCTGCCTGGCCACCTGGCGTGATGCCAAGcaac                   <  1:209088/149‑1 (MQ=255)                                                                                                                              ggATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGcaac                   <  4:186743/149‑1 (MQ=255)                                                                                                                                   accaccAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAAcag              <  4:139418/149‑1 (MQ=255)                                                                                                                                    ccaccaGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAAcag              >  2:253220/1‑148 (MQ=255)                                                                                                                                     caccaGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAAcagca            <  6:175804/149‑1 (MQ=255)                                                                                                                                       ccaGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTgcgcaactggtggttatccgcatggataccccgggcgggctggacagtgccatgcgccagatgatcaaggcaattctctccagcaccgtacccgtcgccagctacgttgccc          <  3:286881‑M2/149‑113 (MQ=255)                                                                                                                                       ccaGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACagcagc          <  7:243221/149‑1 (MQ=255)                                                                                                                                       ccaGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACagcagc          <  4:108041/149‑1 (MQ=255)                                                                                                                                          gTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTgcgcaactggtggttatccgcatggataccccgggcgggctggacagtgccatgcgccagatgatcaaggcaattctctccagcaccgtacccgtcgccagctacgttgcccc         <  8:184062‑M2/147‑114 (MQ=255)                                                                                                                                             gcgcgcCTTGCGCCTGGGCCTGGCCGAGGCTgcgcaactggtggttatccgcatggataccccgggcgggctggacagtgccatgcgccagatgatcaaggcaattctctccagcaccgtacccgtcgccagctacgttgcccccgccg    <  5:12139‑M2/149‑119 (MQ=255)                                                                                                                                              cgcgcCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGc    <  1:137203/148‑1 (MQ=255)                                                                                                                                               gcgcCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGcc   >  6:142870/1‑148 (MQ=255)                                                                                                                                               gcagcctcggccaggcccaggcgcaaggcgcgcaactggtggttatccgcatggataccccgggcgggctggacagtgccatgcgccagatgatcaaggcaattctctccagcaccgtacccgtcgccagctacgttgcccccagcggc  >  2:3954‑M1/1‑2 (MQ=255)                                                                                                                                                |                                                                                                                                                    GGTGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCGCCTTGCGCCTGGGCCTGGCCGAGGCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCCA  >  NC_002947/250891‑251181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.