New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2807026 =	45 (0.860)	3 (0.060)	3/250	NT	6.5%	coding (400/969 nt)	Nuh	ribonucleoside hydrolase
	?	NC_002947	2807079 =	44 (0.900)					coding (453/969 nt)	Nuh	ribonucleoside hydrolase

CGATCTACGCCGCCGACGTTCATGGCGAAGAAGGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGCGGAGTTCAACCTCTACGCCGACC  >  NC_002947/2806880‑2807173                                                                                                                                                     |                                                                                                                                                    cggcaggtaggtcagctgcacgccgctggccagcaccacttcggcggcgtgcgggtcggcgtagaggttgaactccgccaccggggtgatgttgccgccgttgaaatgcgctccccccatgaccaccacctccttgatgcctttgacga                                                                                                                                                     <  3:28197‑M1/1‑1 (MQ=255)       gtaggtcagctgcacgccgctggccagcaccacttcggcggcgtgcgggtcggcgtagaggttgaactccgccaccggggtgatgttgccgccgttgaaatgcgctccccccatgaccaccacctccttgatgcctttgacgATGCTCg                                                                                                                                               <  7:178721‑M1/7‑1 (MQ=255)        cgccgcCGACGTTCATGGCGAAGAAGGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCgg                                                                                                                                              <  3:214927/147‑1 (MQ=255)          ccgccgACGTTCATGGCGAAGAAGGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCg                                                                                                                                          <  6:66899/149‑1 (MQ=255)                   ttCATGGCGAAGAAGGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAAc                                                                                                                                 <  1:32263/149‑1 (MQ=255)                    tCATGGCGAAGAAGGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAAcc                                                                                                                                >  7:170815/1‑149 (MQ=255)                           gaagaaGGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAAcctggccct                                                                                                                         >  3:17618/1‑149 (MQ=255)                             agaagGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAAcctggccctgg                                                                                                                       <  8:170815/149‑1 (MQ=255)                              gaagGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAAcctggccctggc                                                                                                                      <  3:296888/149‑1 (MQ=255)                                agGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGgcgc                                                                                                                    <  6:85922/149‑1 (MQ=255)                                         cGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGAcc                                                                                                                                    <  7:269810/124‑1 (MQ=255)                                         cGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGAcc                                                                                                                                    >  8:269810/1‑124 (MQ=255)                                             gTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGccc                                                                                                       >  4:310990/1‑149 (MQ=255)                                                     gCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCAAGCGCCCGAGCATCg                                                                                               >  2:127112/1‑149 (MQ=255)                                                      cACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGt                                                                                              <  4:270783/149‑1 (MQ=255)                                                       aCGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGt                                                                                              >  1:249943/1‑148 (MQ=255)                                                          aGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGCAAAAACCTGGTCGATACCCTCGCCGCAGTCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACATGCCCCTGCCGCTGATCCAGCGCCCGAGCAGCGGCa                                                                                            >  1:222424/1‑148 (MQ=255)                                                             gtagaggttgaactccgccaccggggtgatgttgccgccgttgaaatgcgctccccccatgaccaccacctccttgatgcctttgacgATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAg                                                                                         >  5:321535‑M1/89‑149 (MQ=255)                                                                 cattgcccTGGGCCAGGGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCAt                                                                                     >  6:15799/6‑148 (MQ=255)                                                                  gcgcCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCaa                                                                                  <  2:249943/149‑1 (MQ=255)                                                                    gcCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAag                                                                                 >  8:144984/1‑148 (MQ=255)                                                                     ccccTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAagga                                                                               <  4:279062/149‑1 (MQ=255)                                                                        cTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAggt                                                                            <  4:39902/149‑1 (MQ=255)                                                                         ctccgccaccggggtgatgttgccgccgttgaaatgcgctccccccatgaccaccacctccttgatgcctttgacgATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGt                                                                                              <  4:208384‑M1/56‑1 (MQ=255)                                                                         ctccgccaccggggtgatgttgccgccgttgaaatgcgctccccccatgaccaccacctccttgatgcctttgacgATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGt                                                                                              >  3:208384‑M1/77‑132 (MQ=255)                                                                            cccA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAggtggtg                                                                        <  3:310990/149‑1 (MQ=255)                                                                                 gggCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGTCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCa                                                                    <  2:222424/149‑1 (MQ=255)                                                                                       tGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATggggg                                                              <  8:267668/149‑1 (MQ=255)                                                                                       tGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATggggg                                                              >  8:47409/1‑149 (MQ=255)                                                                                          cGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAg                                                           >  3:224853/1‑149 (MQ=255)                                                                                           gTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGCCATCAAGGAGGTGGTGGTCATGGGGGGAgc                                                          >  1:143517/1‑149 (MQ=255)                                                                                             gC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAgcg                                                         >  4:19850/1‑148 (MQ=255)                                                                                                    ccTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCaaa                                                                                          >  4:53964/1‑109 (MQ=255)                                                                                                    ccTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCaaa                                                                                          <  3:53964/109‑1 (MQ=255)                                                                                                     cTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCaa                                                 >  2:108992/1‑149 (MQ=255)                                                                                                           gATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAAcggcg                                            <  5:292391/148‑1 (MQ=255)                                                                                                            aTACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACggcggc                                          <  4:17618/149‑1 (MQ=255)                                                                                                                ccTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAggtgg                                                                          <  8:275517/113‑1 (MQ=255)                                                                                                                ccTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAggtgg                                                                          >  7:275517/1‑113 (MQ=255)                                                                                                                 cTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACAt                                     >  7:121668/1‑149 (MQ=255)                                                                                                                    ggCTCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCAc                                  <  5:15799/149‑1 (MQ=255)                                                                                                                    ggCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCa                                   <  8:121668/148‑1 (MQ=255)                                                                                                                          gCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGt                            >  5:306581/1‑149 (MQ=255)                                                                                                                             gAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGc                         <  7:144984/149‑1 (MQ=255)                                                                                                                                  acacaGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCACGGTGGCGGAGt                    >  5:290819/1‑149 (MQ=255)                                                                                                                                   cacaGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGCGGAGtt                   >  8:16202/1‑149 (MQ=255)                                                                                                                                       gCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGCGGAGTTCAAc               <  3:19850/149‑1 (MQ=255)                                                                                                                                         aTCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGGGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCCCCCCGGTGGCGGAGGTCAACct             >  1:247675/1‑149 (MQ=255)                                                                                                                                             ccGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGCGGAGTTCAACCTCTAc         <  4:224853/149‑1 (MQ=255)                                                                                                                                             ccGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGGGGTCATGGGGGGCGCGCATTTCAACGGCGGCCACATCACCCCCGTGGCGGAGTTCAACCTCTAc         >  7:306076/1‑149 (MQ=255)                                                                                                                                                tCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGCGGAGTTCAACCTCTACGcc      >  8:178721/1‑149 (MQ=255)                                                                                                                                                    cATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATggggg                                                              <  5:14766/89‑1 (MQ=255)                                                                                                                                                    cATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATggggg                                                              >  6:14766/1‑89 (MQ=255)                                                                                                                                                    cATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGCGGAGTTCAACCTCTACGCCGAcc  >  8:59730/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CGATCTACGCCGCCGACGTTCATGGCGAAGAAGGCCTCACCGGCGTACAGGTGCACGAGCCGAAAGCGCCCCTGGCCCA‑GGGCAATGCCGTGC‑AATACCTGGTCGATACCCTCGGCGCAGCCGAACCACACAGCATCACCGTCGCCATGCTCGGCCCGCAGACCAACCTGGCCCTGGCGCTGATCCAGCGCCCGAGCATCGTCAAAGGCATCAAGGAGGTGGTGGTCATGGGGGGAGCGCATTTCAACGGCGGCAACATCACCCCGGTGGCGGAGTTCAACCTCTACGCCGACC  >  NC_002947/2806880‑2807173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.