| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3068814 = | 50 (0.960) | 5 (0.100) | 3/250 | NT | 9.4% | intergenic (+65/‑98) | qedH‑II/aldB‑II | quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase |
| ? | NC_002947 | 3068855 = | 49 (1.000) | intergenic (+106/‑57) | qedH‑II/aldB‑II | quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase | |||||
AGGACTTCAACCAGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATCCTTCA > NC_002947/3068670‑3068957 | ctgcacgaactcgccaccgatgaagttgccataacggggtttgaaggatacgacggcgcctggagttccgggttgtgcgtagatcatgctgagcctctgcgggtcggtgcctgtcccacgacaggcgatgcaccgatggtaagaagtcc > 6:146376‑M1/145‑146 (MQ=255) gACTTCAACCAGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCg > 5:76594/1‑149 (MQ=255) aCTTCAACCAGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGc < 5:219867/149‑1 (MQ=255) cAACCAGGGCGGCATGCTCTGGGCCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGc > 8:242198/1‑148 (MQ=255) gggCGGCATGCTCTGGACCTTCAAGTTGCCCAACCAGTTGCAGCAAACCGCAAGCGTCAACCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCCGTGCCAAGCGCCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGAt > 8:33049/1‑149 (MQ=255) cATGCTCTGGGCCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTc < 7:242198/149‑1 (MQ=255) gCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGcc > 5:286068/1‑149 (MQ=255) tctGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCg > 4:247063/1‑149 (MQ=255) cTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑cgcg > 2:93149/1‑149 (MQ=255) acggggtttgaaggatacgacggcgcctggagttccgggttgtgcgtagatcatgctgagcctctgcgggtcggtgcctgtcccacgacaggcgatgcaccgatggtaagaAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCggg > 1:270656‑M1/112‑149 (MQ=255) acggggtttgaaggatacgacggcgcctggagttccgggttgtgcgtagatcatgctgagcctctgcgggtcggtgcctgtcccacgacaggcgatgcaccgatggtaagaAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCggg > 2:172774‑M1/112‑149 (MQ=255) acggggtttgaaggatacgacggcgcctggagttccgcgttgtgcgtagatcatgctgagcctctgcgggtcggtgcctgtcccacgacaggcgatgcaccgatggtaagaAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCggg > 1:174344‑M1/112‑149 (MQ=255) cAAGTTGCCCAAGCAGTTGCAGCAAACGCCAAGCGTCAAGCCAAAACGCCTGCCTACTGCCGCATGCTGCCGCTCATCGGTGGCAAGCGGCCCTACTACCAAATGACGAAACCCCCGCTGCCAACCAACCATTCGCCCGGCA‑‑ccccgcg > 4:142485/1‑143 (MQ=255) aaGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGc > 2:159761/1‑149 (MQ=255) aaGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGc > 2:164833/1‑149 (MQ=255) gTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGctt > 7:41570/1‑149 (MQ=255) gCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGcttct < 2:272161/148‑1 (MQ=255) cccAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTa > 2:235328/1‑149 (MQ=255) cAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTAc > 2:256976/1‑148 (MQ=255) gTTGCAGCAAACGGCAAGCATCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGt > 3:172790/1‑149 (MQ=255) gcagcaAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGc < 8:41570/148‑1 (MQ=255) agcaAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATc > 2:11806/1‑149 (MQ=255) caAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGAAATAAAAACAAAAGACGAGAACCCCGCAGCCAAACCTGCATTAGCCCCGCA‑‑CGCCGGGCGTATTACCATCGGTGCaaagc > 1:100923/1‑145 (MQ=255) ggCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCGTCTGACCATCGGTGCATCGCCTGTc > 4:156557/1‑149 (MQ=255) agttccgggttgtgcgtagatcatgctgagcctctgcgggtcggtgcctgtcccacgacaggcgatgcaccgatggtaagaAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCgggg < 2:242034‑M1/39‑1 (MQ=255) agttccgggttgtgcgtagatcatgctgagcctctgcgggtcggtgcctgtcccacgacaggcgatgcaccgatggtaagaAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCgggg > 1:242034‑M1/82‑120 (MQ=255) aGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTgg < 5:79102/149‑1 (MQ=255) gcctgcctACTGCCGCTAGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCg > 4:236679/1‑149 (MQ=255) gactgcctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCg < 4:35766/147‑1 (MQ=255) ctgcctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTgg > 7:216317/1‑131 (MQ=255) ctgcctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTgg < 8:216317/131‑1 (MQ=255) ctgcctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCa < 6:286068/149‑1 (MQ=255) ctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAgg < 1:164833/149‑1 (MQ=255) ctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAgg < 1:159761/149‑1 (MQ=255) cTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACTCGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGc < 1:93149/149‑1 (MQ=255) tGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGAc < 6:109063/136‑1 (MQ=255) tGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGAc > 5:109063/1‑136 (MQ=255) tGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCt > 4:113893/1‑147 (MQ=255) gCCGCTTGCCACCGATCAGCGGCAGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAg > 3:200148/1‑149 (MQ=255) ccGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCATGTCGTGGGACAGGCACCGACCCGCAGAGCGTCAg > 7:128200/1‑148 (MQ=255) ctgcCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCt < 3:142485/149‑1 (MQ=255) cGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACg > 4:47612/1‑148 (MQ=255) gCTGATCGGTGGCAAGCGGCCCCACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGca > 6:165641/1‑149 (MQ=255) tCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAAcc < 3:47612/149‑1 (MQ=255) gTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGAACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCgg < 1:235328/149‑1 (MQ=255) gCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGaa < 1:11806/148‑1 (MQ=255) gCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGaa < 3:113893/148‑1 (MQ=255) aaGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGAt > 2:183303/1‑129 (MQ=255) aaGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGAt < 1:183303/129‑1 (MQ=255) ctacCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAAc > 7:175383/1‑129 (MQ=255) ctacCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAAc < 8:175383/129‑1 (MQ=255) ccAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTa > 4:99770/1‑149 (MQ=255) ccAAATGACGAGAGCCACGCTGCCAACGATGCAATCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGAGGGACAGGCACCGCCCCGCAGAGGCTCAGCATGGTCTACGCACAACCCGGAACTCCAGGCGCCGTCGTa > 1:204717/1‑149 (MQ=255) aaaTGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATc < 3:247063/149‑1 (MQ=255) aaTGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATcc > 3:134733/1‑149 (MQ=255) aaTGACGAGAGCCCCGCTGCCAACGAGGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTAAGCACAACCCGGAACTCCAGGCGCCGTCGTATcc > 1:175238/1‑149 (MQ=255) cGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATCCTTCa < 4:200148/148‑1 (MQ=255) gagaGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCa > 7:104490/1‑99 (MQ=255) gagaGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCa < 8:104490/99‑1 (MQ=255) | AGGACTTCAACCAGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCA‑‑CGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATCCTTCA > NC_002947/3068670‑3068957 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |