New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4529988 =	32 (0.610)	4 (0.080)	4/252	NT	10.8%	coding (423/429 nt)	PP_4018	acetyltransferase
	?	NC_002947	4530052 =	36 (0.730)					intergenic (+58/‑110)	PP_4018/topB	acetyltransferase/DNA topoisomerase III

CGAAGCGCAGAACCGCGACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGC  >  NC_002947/4529841‑4530133                                                                                                                                                    |                                                                                                                                                   ttgcctgggagggtttttcgcagagaaacaggcgcatggccggggacgcttcatcggggtggtgggccataggatgcgcaagcgggggcgcagaggcaagttttatctggatggatgtacaggttttttgtcagcggggatgtatatc                                                                                                                                                    >  4:53491‑M1/148‑148 (MQ=255)  gAAGCGCAGAACCGCGACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTcgcgcg                                                                                                                                                   <  8:75790/148‑1 (MQ=255)  gAAGCGCAGAACCGCGACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCgcgcgc                                                                                                                                                  <  8:237523/149‑1 (MQ=255)   aaGCGCAGAACCGCGACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGcc                                                                                                                                                 >  7:34638/1‑149 (MQ=255)     ctgggagggtttttcgcagagaaacaggcgcatggccggggacgcttcatcggggtggtgggccataggatgcgcaagcgggggcgcagaggcaagttttatctggatggatgtacaggttttttgtcagcggggatgtatatCGCCt                                                                                                                                                <  7:99596‑M1/5‑1 (MQ=255)       gcAGAACCGCGACCTGAAACAGGAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGAt                                                                                                                                             <  7:141749/149‑1 (MQ=255)              cgcgACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGATCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGCCATCCCCCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCAc                                                                                                                                      >  3:291787/1‑149 (MQ=255)               gcgACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCAcc                                                                                                                                     >  6:30728/1‑149 (MQ=255)               gcgACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCAcc                                                                                                                                     >  3:117378/1‑149 (MQ=255)                     tGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACt                                                                                                                               >  8:33250/1‑149 (MQ=255)                      gAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTg                                                                                                                              >  7:66675/1‑149 (MQ=255)                       aaaCAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCTCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTg                                                                                                                              <  7:297684/148‑1 (MQ=255)                       aaaCAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACt                                                                                                                               <  3:292435/147‑1 (MQ=255)                       aaaCAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTgg                                                                                                                             >  1:208154/1‑149 (MQ=255)                               gATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTcg                                                                                                                     >  3:295457/1‑149 (MQ=255)                                aTGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCCCTTcgc                                                                                                                    <  4:117378/149‑1 (MQ=255)                                   cTCAGCGCCCAGGTTCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCgg                                                                                                                  <  6:82065/148‑1 (MQ=255)                                   cTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCgg                                                                                                                  <  8:34638/148‑1 (MQ=255)                                   cTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCgg                                                                                                                  <  2:208154/148‑1 (MQ=255)                                          cccAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑ccc                                                                                                         <  4:104618/149‑1 (MQ=255)                                           ccAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCcg                                                                                                        <  6:324711/149‑1 (MQ=255)                                              ggTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGa                                                                                                     <  5:30728/149‑1 (MQ=255)                                               gTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGaa                                                                                                    <  4:105864/149‑1 (MQ=255)                                               gTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTAAA‑CCCGCGaa                                                                                                    <  7:33250/149‑1 (MQ=255)                                                  cacgccacgcCGTTCTATGAGCGGCTGTGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGTGATTA‑CCCGCGAagag                                                                                                 <  6:96057/149‑1 (MQ=255)                                                     atcggggtggtgggccataggatgcgcaagcgggggcgcagaggcaagttttatctggatggatgtacaggttttttgtcagcggggatgtatatCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAagag                                                                                                 >  1:51888‑M1/96‑146 (MQ=255)                                                     atcggggtggtgggccataggatgcgcaagcgggggcgcagaggcaagttttatctggatggatgtacaggttttttgtcagcggggatgtatatCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAagag                                                                                                 <  2:51888‑M1/51‑1 (MQ=255)                                                        ggggtggtgggccataggatgcgcaagcgggggcgcagaggcaagttttatctggatggatgtacaggttttttgtcagcggggatgtatatCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGaa                                                                                                    <  5:88035‑M1/48‑1 (MQ=255)                                                        ggggtggtgggccataggatgcgcaagcgggggcgcagaggcaagttttatctggatggatgtacaggttttttgtcagcggggatgtatatCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGaa                                                                                                    >  6:88035‑M1/93‑140 (MQ=255)                                                                  aTGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCAGGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGTCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGat                                                                                  <  6:22618/148‑1 (MQ=255)                                                                                tttCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTAGCGGGGTTT‑CACGCGCAGAGGCCGGCTCAGGCGCTATACATACCCGCTg                                                                    >  7:117952/1‑148 (MQ=255)                                                                                 ttCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATACCCGCTGa                                                                   >  5:8769/1‑148 (MQ=255)                                                                                  tCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCATCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCCATATACATCCCCCCTGaa                                                                  >  8:187179/1‑147 (MQ=255)                                                                                      gTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACaaaa                                                              >  8:99596/1‑148 (MQ=255)                                                                                             gCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTa                                                      >  8:179877/1‑149 (MQ=255)                                                                                             gCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACATGTa                                                      >  4:216396/1‑149 (MQ=255)                                                                                                aGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTAGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGCTATAACTCCCCGCTGACAAAAAACCTTTAca                                                    >  5:49323/1‑148 (MQ=255)                                                                                                   aaTCCCTCTACGCGGGCACCCCCCTTGGCGAATGGGGGCGCGACGCGCGCGCTTCACCCACCCCCTCCCGGGGCCTCTGCG‑GGGTTTACCCCGCTAAGTGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTAcatcc                                                 <  6:8769/148‑1 (MQ=255)                                                                                                              gCTGGCATCCCGCATGTCGACATGGTGCGCGACTCgcgcgc                                                                                                                                                  <  4:40556/41‑1 (MQ=255)                                                                                                              gCTGGCATCCCGCATGTCGACATGGTGCGCGACTCgcgcgc                                                                                                                                                  >  3:40556/1‑41 (MQ=255)                                                                                                                tGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACt                                   >  2:12980/1‑149 (MQ=255)                                                                                                                    aTCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCATAGCCGGTTTA‑ACCTCGAAGAGGCCGGCTCAGTCGATATACAACCCCCCAGACAAAAAACCAGTACCTACATCCAGATAAAACttcc                                >  8:275940/1‑146 (MQ=255)                                                                                                                                       tGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTgcg             >  7:140456/1‑148 (MQ=255)                                                                                                                                               tCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATg    >  7:70013/1‑149 (MQ=255)                                                                                                                                                 gcgcgcCTTATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATg    <  8:66675/147‑1 (MQ=255)                                                                                                                                                 gcgcgcCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATAAATCACCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGc  >  2:41501/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CGAAGCGCAGAACCGCGACCTGAAACAGCAGATGCTCAGCGCCCAGGTGCACGCCACGCCGTTCTATGAGCGGCTGGGCTTTCGCGTAGTCAGCGAGGAATTCCTCGAAGCTGGCATCCCGCATGTCGACATGGTGCGCGACTCGCGCGCCTGATCCATCACCTGCACTGGCCTCTTCGCGGGTTTA‑CCCGCGAAGAGGCCGGCTCAGGCGATATACATCCCCGCTGACAAAAAACCTGTACATCCATCCAGATAAAACTTGCCTCTGCGCCCCCGCTTGCGCATCCTATGGC  >  NC_002947/4529841‑4530133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.