New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 572401264 (1.230)4 (0.080) 4/250 NT 6.1% coding (87/801 nt) PP_5024 amino acid ABC transporter substrate‑binding protein
?NC_002947 = 5724035 64 (1.310)coding (64/801 nt) PP_5024 amino acid ABC transporter substrate‑binding protein

TCGAACTTCACGCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTACTGGCC  >  NC_002947/5723872‑5724159
                                                                                                                                             |                                                                                                                                                   
tCGAACTTCACGCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATCTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGAt                                                                                                                                             >  1:266601/1‑149 (MQ=255)
  gAACTTCACGCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGgcccaggcgg                                                                                                                                           >  3:81193‑M1/1‑139 (MQ=255)
  gAACTTCACGCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGAt                                                                                                                                             <  6:30419/147‑1 (MQ=255)
      ttCACGCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGcgcc                                                                                                                                       >  1:286978/1‑149 (MQ=255)
        ccagCCCATGGAATTGGCAATGGCTTTGAGGAGATCGACTGCGAAGCCTATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGcgccc                                                                                                                                      <  6:174534/145‑1 (MQ=255)
         aCGCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGcgcccgc                                                                                                                                    >  5:172162/1‑149 (MQ=255)
           gCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCt                                                                                                                                  >  3:314022/1‑149 (MQ=255)
                   acgtGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCcgcg                                                                                                                          <  6:273962/146‑1 (MQ=255)
                   aCTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCcgcg                                                                                                                          >  2:138187‑M2/1‑145 (MQ=255)
                   aCTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCAGCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCcgcg                                                                                                                          >  4:314022‑M2/1‑145 (MQ=255)
                       ggCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCcgcggtca                                                                                                                      <  6:121325‑M2/149‑9 (MQ=255)
                        gCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGgcccaggcgggcgccatcgacgacgcggtcaa                                                                                                                     <  3:264106‑M1/149‑33 (MQ=255)
                          cATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGgcccaggcgggcgccatcgacgacgcggtcaagc                                                                                                                   <  4:81193‑M1/149‑35 (MQ=255)
                           aTGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGc                                                                                                                  >  7:264498/1‑149 (MQ=255)
                              gCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGgcccaggcgggcgccatcgacgacgcggtcaagcgtg                                                                                                                <  7:239565‑M1/148‑38 (MQ=255)
                               cTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGAcc                                                                                                              <  4:91238/149‑1 (MQ=255)
                                tttGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGgcgc                                                                                                                                        <  6:312017/122‑1 (MQ=255)
                                tttGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGgcgc                                                                                                                                        >  5:312017/1‑122 (MQ=255)
                                      atcatCGGCTTCGAAGTCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCgg                                                                                                       >  7:71502/4‑149 (MQ=255)
                                         atCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTca                                                                                                    >  4:120787/1‑149 (MQ=255)
                                          tCGACTTCGAAGCCGATGATCTCGCCCCGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTccc                                                                                                   >  7:88806/1‑147 (MQ=255)
                                                  gAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGAc                                                                                             >  3:302301/1‑147 (MQ=255)
                                                    aGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTc                                                                                                     <  1:56965/137‑1 (MQ=255)
                                                    aGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTc                                                                                                     >  2:56965/1‑137 (MQ=255)
                                                      ccGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCACGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACcagcag                                                                                       >  5:130396/1‑149 (MQ=255)
                                                        gatgatCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAgg                                                                                                           >  8:62921/1‑127 (MQ=255)
                                                        gatgatCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAgg                                                                                                           <  7:62921/127‑1 (MQ=255)
                                                        gatgatCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTc                                                                                     >  6:124213/1‑149 (MQ=255)
                                                           gatCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCAATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTcgc                                                                                   >  3:15956/1‑148 (MQ=255)
                                                              ctcGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTcg                                                                                    >  5:214136/1‑144 (MQ=255)
                                                              ctcGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTcg                                                                                    <  6:214136/144‑1 (MQ=255)
                                                              ctcGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGa                                                                                 >  7:210055/1‑147 (MQ=255)
                                                              ctcGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGa                                                                                 >  2:251675/1‑147 (MQ=255)
                                                                 gCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGaaa                                                                               <  6:172162/146‑1 (MQ=255)
                                                                 gCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGaaa                                                                               <  1:251675/146‑1 (MQ=255)
                                                                   cACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTAt                                                                          >  4:188005/1‑149 (MQ=255)
                                                                      gTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTc                                                                       <  2:286978/149‑1 (MQ=255)
                                                                          gttgGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTg                                                                    <  8:210055/148‑1 (MQ=255)
                                                                           ttgGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGa                                                                   <  8:130180/148‑1 (MQ=255)
                                                                           ttgGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCCCAGCGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGat                                                                  >  4:189024/1‑149 (MQ=255)
                                                                              gTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGatcat                                                               <  2:110663/149‑1 (MQ=255)
                                                                                   cTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCAcc                                                           >  4:266231/1‑148 (MQ=255)
                                                                                    tGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCAcc                                                           >  1:44237/1‑148 (MQ=255)
                                                                                     ggAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAg                                                                              >  1:71132/1‑127 (MQ=255)
                                                                                     ggAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAg                                                                              <  2:71132/127‑1 (MQ=255)
                                                                                      gAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCa                                                          <  2:44237/146‑1 (MQ=255)
                                                                                           gCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTcccc                                                   >  6:222086/1‑148 (MQ=255)
                                                                                               gTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTa                                                                           <  7:182996/120‑1 (MQ=255)
                                                                                               gTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTa                                                                           >  8:182996/1‑120 (MQ=255)
                                                                                                 aaGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGc                                               >  8:112827/1‑146 (MQ=255)
                                                                                                      gggTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAg                                       <  8:71502/149‑1 (MQ=255)
                                                                                                        gTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGATCAGCAGTCGCGAAAGGTATTTCTTGatc                                                                 <  1:180454/121‑1 (MQ=255)
                                                                                                        gTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTc                                                                                     <  5:46085/101‑1 (MQ=255)
                                                                                                        gTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTc                                                                                     >  6:46085/1‑101 (MQ=255)
                                                                                                        gTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGatc                                                                 >  2:185573/1‑121 (MQ=255)
                                                                                                        gTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGatc                                                                 >  2:180454/1‑121 (MQ=255)
                                                                                                        gTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGatc                                                                 <  1:185573/121‑1 (MQ=255)
                                                                                                           cATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGc                                   <  8:278643/148‑1 (MQ=255)
                                                                                                            aTGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCg                                  >  1:211274/1‑148 (MQ=255)
                                                                                                             tGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGaa                                >  3:52459/1‑149 (MQ=255)
                                                                                                              gCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGCCCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGAACATCACCAAGTCCCCTAGCAAGAAAAGTAGCGaa                                >  2:290880/1‑148 (MQ=255)
                                                                                                               cccACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATc                              <  5:121325/149‑1 (MQ=255)
                                                                                                                ccACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCt                             >  7:76114/1‑149 (MQ=255)
                                                                                                                  aCCCGCAGGGTGCCACGCTTGACCGCGTCGTCAATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTa                           <  4:15956/149‑1 (MQ=255)
                                                                                                                    ccGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTAtt                         <  6:20868/149‑1 (MQ=255)
                                                                                                                        cAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATtgtg                      >  1:123992/1‑149 (MQ=255)
                                                                                                                           ggTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTg                   <  8:264498/149‑1 (MQ=255)
                                                                                                                                cACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCcgcggtcaagcgtggcaccctgcgggtgggcatggacccgacttacatgccgttccagatgaccaacaaacgtggcgagatcatcggcttcgaagtcgatatcctcaaagc               <  7:239565‑M2/148‑112 (MQ=255)
                                                                                                                                   gCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCcgcggtcaagcgtggcaccctgcgggtgggcatggacccgacttacatgccgttccagatgaccaacaaacgtggcgagatcatcggcttcgaagtcgatatcctcaaagccatg           <  4:81193‑M2/149‑116 (MQ=255)
                                                                                                                                   gCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGTCCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGcc           <  6:130396/149‑1 (MQ=255)
                                                                                                                                     ttGACCGCGTCGTCGATGGCGCCCGCCTGGGCcgcggtcaagcgtggcaccctgcgggtgggcatggacccgacttacatgccgttccagatgaccaacaaacgtggcgagatcatcggcttcgaagtcgatatcctcaaagccatggc         <  3:264106‑M2/149‑118 (MQ=255)
                                                                                                                                      tGACCGCGgcccaggcgggcgccatcgacgacgcggtcaagcgtggcaccctgcgggtgggcatggacccgacttacatgccgttccagatgaccaacaaacgtggcgagatcatcggcttcgaagtcgatatcctcaaagccatggcc        <  6:121325‑M1/149‑142 (MQ=255)
                                                                                                                                       gACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGt         <  3:189024/147‑1 (MQ=255)
                                                                                                                                       gACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTAc       >  3:303424/1‑149 (MQ=255)
                                                                                                                                        aCCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTAc       <  3:188005/148‑1 (MQ=255)
                                                                                                                                          cgcggcccaggcgggcgccatcgacgacgcggtcaagcgtggcaccctgcgggtgggcatggacccgacttacatgccgttccagctgaccaacaaacgtggcgagatcatcggcttcgaagtcgatatcctcaaagccatggccaagt    >  4:314022‑M1/1‑4 (MQ=255)
                                                                                                                                          cgcggcccaggcgggcgccatcgacgacgcggtcaagcgtggcaccctgcgggtgggcatggacccgacttacatgccgttccagatgaccaacaaacgtggcgagatcatcggcttcgaagtcgatatcctcaaagccatggccaagt    >  2:138187‑M1/1‑4 (MQ=255)
                                                                                                                                           gcgTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTACTGGc   <  4:52459/149‑1 (MQ=255)
                                                                                                                                             gtcgtcGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTACTGGcc  >  5:165398/1‑148 (MQ=255)
                                                                                                                                             |                                                                                                                                                   
TCGAACTTCACGCCCATGGACTTGGCCATGGCTTTGAGGATATCGACTTCGAAGCCGATGATCTCGCCACGTTTGTTGGTCATCTGGAACGGCATGTAAGTCGGGTCCATGCCCACCCGCAGGGTGCCACGCTTGACCGCGTCGTCGATGGCGCCCGCCTGGGCCGCGGTCACGGCGACCAGGGCGGTCACACCGACCAGCAGTCGCGAAAGGTATTTCTTGATCATCACCAAGTCCCCTAGCAAGAAAAGTAGCGAATCTTATTGTGTTGGCACGGCCGTACTGGCC  >  NC_002947/5723872‑5724159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.