New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 6525077 (1.480)4 (0.080) 4/258 NT 5.5% coding (308/1653 nt) betA‑I choline dehydrogenase
?NC_002947 = 65282 64 (1.270)coding (340/1653 nt) betA‑I choline dehydrogenase

CACAGACTGGTGCTTCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATG  >  NC_002947/65134‑65429
                                                                                                                                                     |                                                                                                                                                   
cacaGACTGGTGCTTCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCcg                                                                                                                                                     >  5:251075/1‑149 (MQ=255)
    gACTGGTGCTTCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGcgc                                                                                                                                                  <  1:116862‑M2/148‑4 (MQ=255)
     aCTGGTGCTTCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGcgc                                                                                                                                                  <  8:253640‑M2/147‑4 (MQ=255)
       tGGTGCTTCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAgg                                                                                                                                              >  2:185199/1‑149 (MQ=255)
             ttCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAacga                                                                                                                                        >  7:287784/1‑149 (MQ=255)
                aaGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACgg                                                                                                                                     >  3:271781/1‑149 (MQ=255)
                        ggCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGt                                                                                                                             <  3:74014/149‑1 (MQ=255)
                         gCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTg                                                                                                                            >  2:284722/1‑149 (MQ=255)
                           acaACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAg                                                                                                                                               <  3:273628/128‑1 (MQ=255)
                           acaACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAg                                                                                                                                               >  4:273628/1‑128 (MQ=255)
                              aCCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAg                                                                                                                       <  7:253640/149‑1 (MQ=255)
                                cTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGAt                                                                                                                     >  5:152068/1‑149 (MQ=255)
                                 tGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGAtg                                                                                                                    >  5:297199/1‑149 (MQ=255)
                                   gCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGAtgt                                                                                                                   <  1:284722/148‑1 (MQ=255)
                                   gCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGAtgt                                                                                                                   <  6:137850/148‑1 (MQ=255)
                                     cTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAg                                                                                                                                               >  8:285976/1‑118 (MQ=255)
                                     cTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAg                                                                                                                                               <  7:285976/118‑1 (MQ=255)
                                        ggcggTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTa                                                                                                               <  7:250523/147‑1 (MQ=255)
                                        ggcggTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTAc                                                                                                              <  1:185199/148‑1 (MQ=255)
                                             tCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGcgc                                                                                                                                                  >  4:146422‑M2/1‑104 (MQ=255)
                                             tCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGcgc                                                                                                                                                  <  3:146422‑M2/107‑4 (MQ=255)
                                              cgcgCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGtt                                                                                                       >  6:268887/1‑149 (MQ=255)
                                               gcgcTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGtt                                                                                                       <  7:153145/148‑1 (MQ=255)
                                                 gcTTTGGGTTATCCAAGGGTCAAGGTGATAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCAGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCaa                                                                                                    <  3:215270/149‑1 (MQ=255)
                                                  cTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAg                                                                                                   <  2:280213/149‑1 (MQ=255)
                                                       ggTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAg                                                                                              >  8:164705/1‑149 (MQ=255)
                                                        gTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGc                                                                                             <  6:189479/149‑1 (MQ=255)
                                                              cAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTg                                                                                                         >  6:272529/1‑131 (MQ=255)
                                                              cAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGaaaa                                                                                        <  4:310932/148‑1 (MQ=255)
                                                              cAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAAc                                                                                       >  1:184975/1‑149 (MQ=255)
                                                              cAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACAAGCAACAATTGGGCCGCCAAAGAAAACAACGGATGGGGGTGGAAAAATGTTTTACACCTGTTCAAGCCCAGCAaaaa                                                                                        >  1:264390/1‑149 (MQ=255)
                                                              cAAGGGGCAAGGTGCTAGGTGGCTGTTCATCGATCAACGGCATGATCTACATGCGGGGACAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAAc                                                                                       >  1:179901/1‑149 (MQ=255)
                                                               aaGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCATGGCCAGCGAAAAc                                                                                       >  8:109479/1‑148 (MQ=255)
                                                               aaGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGc                                                                                             >  3:68542/1‑142 (MQ=255)
                                                               aaGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGc                                                                                             <  4:68542/142‑1 (MQ=255)
                                                                aGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCa                                                                                     <  2:248298/149‑1 (MQ=255)
                                                                   ggCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACtt                                                                                  <  1:278271/149‑1 (MQ=255)
                                                                    gCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACttt                                                                                 <  6:59337/149‑1 (MQ=255)
                                                                      aaGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCa                                                                                               <  8:130505/133‑1 (MQ=255)
                                                                      aaGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCa                                                                                               >  7:130505/1‑133 (MQ=255)
                                                                         gTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAgg                                                                            <  8:287784/149‑1 (MQ=255)
                                                                         gTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAgg                                                                            <  6:162284/149‑1 (MQ=255)
                                                                                gTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGTCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTTCCGCTGTTAAAGTCCAGCGAAAACCACTTTGCAGGCGcc                                                                        <  7:111430/146‑1 (MQ=255)
                                                                                gTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGcc                                                                        >  8:111430/1‑146 (MQ=255)
                                                                                gTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGc                                                                     >  4:243774/1‑149 (MQ=255)
                                                                                gTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGc                                                                     <  6:293571/149‑1 (MQ=255)
                                                                                  ggCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCt                                                                                                          <  6:165722/110‑1 (MQ=255)
                                                                                  ggCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCt                                                                                                          >  5:165722/1‑110 (MQ=255)
                                                                                  ggCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGACAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGa                                                                   >  3:85065/1‑149 (MQ=255)
                                                                                         cgtcgATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGcacca                                                             <  6:226/148‑1 (MQ=255)
                                                                                         cgtcgATCAACCGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGCGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGCCCAGCGAAAACCACTTTGCAGGCGCCAGAGAGcccccc                                                            >  7:228444/1‑147 (MQ=255)
                                                                                          gtcgATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCATGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGcaccac                                                            <  7:109479/148‑1 (MQ=255)
                                                                                             gATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGgcg                                                        >  7:164145/1‑149 (MQ=255)
                                                                                                  aCGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGcgcg                                                      >  3:316685/1‑146 (MQ=255)
                                                                                                  aCGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGcgcg                                                      <  4:316685/146‑1 (MQ=255)
                                                                                                    ggCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAggg                                                 >  4:111101/1‑149 (MQ=255)
                                                                                                    ggCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAggg                                                 <  7:164705/149‑1 (MQ=255)
                                                                                                      cATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACTACGGCGCGGAGGGc                                                >  5:286317/1‑148 (MQ=255)
                                                                                                          aTCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAAt                                            <  2:264390/148‑1 (MQ=255)
                                                                                                          aTCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAAt                                            <  2:184975/148‑1 (MQ=255)
                                                                                                          aTCTACATGCGGGGCCAAGCCGCCGAATACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAAt                                            <  2:179901/148‑1 (MQ=255)
                                                                                                           tCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCAGTTGGCTGGCGCCGGCGCGCGCCCCGGGGGGGGGGGGGatggg                                          >  2:304380/1‑145 (MQ=255)
                                                                                                            cgaccagcgcGGCCAAGCCGCCGACTACGCCCAGAGGGCCGCGCAAGGCAACGACCGCGGCGCGTGGAACCATGTGTGACCGCTGTGCAAGGCCAGCGAAAACCACTTTGCAGCCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGc                                         <  8:270312/143‑1 (MQ=255)
                                                                                                              aCATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGcgcatgtagatcatgccgttgatcgacgaacagccacctagcaccttgccccttggataacccaaagcgcgaccgccgaggccagg                                                               >  4:251264‑M2/1‑39 (MQ=255)
                                                                                                              aCATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGcgcatgtagatcatgccgttgatcgacgaacagccacctagcaccttgccccttggataacccaaagcgcgaccgccgaggccagg                                                               <  3:251264‑M2/125‑87 (MQ=255)
                                                                                                              aCATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAg                                                                  >  3:275791/1‑122 (MQ=255)
                                                                                                              aCATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAg                                                                  <  4:275791/122‑1 (MQ=255)
                                                                                                               cATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAg                                                                                                   >  3:52511/1‑88 (MQ=255)
                                                                                                               cATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGc                                         <  5:268887/146‑1 (MQ=255)
                                                                                                               cATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCggg                                      <  6:152068/149‑1 (MQ=255)
                                                                                                               cATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGATGGGCGTGGAAAGATGTGTTACCGCTGTTCAAg                                                                                                   <  4:52511/88‑1 (MQ=255)
                                                                                                                 tGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGcgcatgtagatcatgccgttgatcgacgaacagccacctagcaccttgccccttggataacccaaagcgcgaccgccgaggccaggttgtgcctcggtcttgaagcaccagtc                                    <  1:322526‑M2/149‑114 (MQ=255)
                                                                                                                      ggCCAAGCCGCCGACTACGACCATTGGGCCGcgcatgtagatcatgccgttgatcgacgaacagccacctagcaccttgccccttggataacccaaagcgcgaccgccgaggccaggttgtgcctcggtcttgaagcaccagtctgtgc                               >  2:322526‑M2/1‑31 (MQ=255)
                                                                                                                         cAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCg                                                                                                            >  2:229772/1‑69 (MQ=255)
                                                                                                                         cAAGCCGCCGACTACGACCATTGCGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCg                                                                                                            <  1:229772/69‑1 (MQ=255)
                                                                                                                              cgccgACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGc                        >  6:137515/1‑148 (MQ=255)
                                                                                                                                 cgACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACa                    <  2:116862/149‑1 (MQ=255)
                                                                                                                                     tACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGAGGCAACGCTAAAGCTg                >  3:46773/1‑149 (MQ=255)
                                                                                                                                                 ggCCGCGCAAGACAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCtt      <  4:85065/148‑1 (MQ=255)
                                                                                                                                                  gCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGa    <  3:243774/149‑1 (MQ=255)
                                                                                                                                                   ccGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGAt   >  2:32269/1‑149 (MQ=255)
                                                                                                                                                    cgcgCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATg  <  6:297199/149‑1 (MQ=255)
                                                                                                                                                    cgcgCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATg  <  4:271781/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CACAGACTGGTGCTTCAAGACCGAGGCACAACCTGGCCTCGGCGGTCGCGCTTTGGGTTATCCAAGGGGCAAGGTGCTAGGTGGCTGTTCGTCGATCAACGGCATGATCTACATGCGGGGCCAAGCCGCCGACTACGACCATTGGGCCGCGCAAGGCAACGACGGCTGGGCGTGGAAAGATGTGTTACCGCTGTTCAAGGCCAGCGAAAACCACTTTGCAGGCGCCAGCGAGCACCACGGCGCGGAGGGCGAATGGCGGGTCGAGCGGCAACGCTACAGCTGGCCGATCCTTGATG  >  NC_002947/65134‑65429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.