New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 159214754 (1.040)4 (0.080) 4/254 NT 7.1% coding (52/294 nt) PP_1396 hypothetical protein
?NC_002947 = 1592195 53 (1.070)coding (100/294 nt) PP_1396 hypothetical protein

GCAGCCTGGCTTTTCCGTCCGCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAGGTGTTCGGTGAACTGG  >  NC_002947/1592053‑1592342
                                                                                                                                              |                                                                                                                                                   
gCAGCCTGGCTTTTCCGTCCGCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTcgctgc                                                                                                                                               >  4:129037‑M2/1‑143 (MQ=255)
   gCCTGGCTTTTCCGTCCGCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTa                                                                                                                                            >  5:282037/1‑149 (MQ=255)
      tGGCTTTTCCGTCCGCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTacac                                                                                                                                         >  8:283243/1‑149 (MQ=255)
          ttttCCGTCCGCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCggg                                                                                                                                     >  5:231330/1‑149 (MQ=255)
          ttttCCGTCCGCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCAGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCCAGCCCTCGCTGCGTACACCggg                                                                                                                                     >  1:128198/1‑149 (MQ=255)
               cgtccgCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGc                                                                                                                                 <  1:290308/148‑1 (MQ=255)
                      cTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGttt                                                                                                                         >  3:180354/1‑149 (MQ=255)
                         cTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTAc                                                                                                                      >  7:132955/1‑149 (MQ=255)
                             aaGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGt                                                                                                                   <  3:70908/148‑1 (MQ=255)
                                      gtgCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTtct                                                                                                         >  6:96047/1‑149 (MQ=255)
                                         cAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAg                                                                                                      <  4:180354/149‑1 (MQ=255)
                                          aaTGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAgg                                                                                                     <  1:296/149‑1 (MQ=255)
                                           aTGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCTAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGc                                                                                                    <  2:216819/149‑1 (MQ=255)
                                               cccTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGAt                                                                                                <  4:140203/149‑1 (MQ=255)
                                                  ttAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCt                                                                                             >  3:11388/1‑149 (MQ=255)
                                                        aacCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCtg                                                                                       >  8:141361/1‑149 (MQ=255)
                                                                acccaccTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCt                                                                               >  5:43314/1‑149 (MQ=255)
                                                                acccaccTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCt                                                                               <  6:43314/149‑1 (MQ=255)
                                                                acccaccTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCt                                                                               <  6:231330/149‑1 (MQ=255)
                                                                  ccaccTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCt                                                                               >  1:99313/1‑147 (MQ=255)
                                                                         gCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCtgt                                                                                      >  1:292611/1‑133 (MQ=255)
                                                                         gCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCtgt                                                                                      <  2:292611/133‑1 (MQ=255)
                                                                         gCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAg                                                                      >  1:456/1‑149 (MQ=255)
                                                                             tCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTgg                                                                                    <  7:264550/131‑1 (MQ=255)
                                                                             tCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTgg                                                                                    >  8:264550/1‑131 (MQ=255)
                                                                             tCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTgg                                                                                    >  8:269021/1‑131 (MQ=255)
                                                                             tCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTgg                                                                                    <  7:269021/131‑1 (MQ=255)
                                                                               aTCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTgg                                                                  >  1:199278/1‑147 (MQ=255)
                                                                                tCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAg                                                               >  5:258981/1‑149 (MQ=255)
                                                                                tCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAg                                                               >  8:72337/1‑149 (MQ=255)
                                                                                  cGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGa                                                             >  6:18773/1‑149 (MQ=255)
                                                                                   gTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGCGCCCTCGCTGCGTCCACCGGGTGGCCGGAGGTTTCCCGTGCAGCGTTCTCAGGCGGCTGCTGACCTGTGGTTGCTCCGCGGAAGCTGGCAGGAc                                                            >  5:299697/1‑149 (MQ=255)
                                                                                      ccAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACcag                                                         <  6:282037/149‑1 (MQ=255)
                                                                                       cagcagCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTcgctgctggcacggatgaaagcaaggtgggtgaccggttgtttaagggtcattgcacaatctccttgaagcaggcggacggaaaagccaggct                                                        <  6:125617‑M2/149‑94 (MQ=255)
                                                                                        agcagcGGGCGCTCGGCAGAGCGGAGCGCGCGCCTGCGTGACATGATCGAGCCATCGATGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTATAAGGCTGATGCTGACCTGTGTTTGATCAGCGGAAGCTGGCAGGACcagcg                                                       >  7:202184/1‑148 (MQ=255)
                                                                                         gcagcGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTcgctgctggcacggatgaaagcaaggtgggtgaccggttgtttaagggtcattgcacaatctcct                                                                                    >  7:97172‑M2/1‑54 (MQ=255)
                                                                                         gcagcGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTcgctgctggcacggatgaaagcaaggtgggtgaccggttgtttaagggtcattgcacaatctcct                                                                                    <  8:97172‑M2/119‑66 (MQ=255)
                                                                                          cagcGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAgg                                                     <  7:141361/149‑1 (MQ=255)
                                                                                             cGGTCGCTCGGGAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGa                                                  <  2:165637/149‑1 (MQ=255)
                                                                                              gggCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGAt                                                 <  3:11593/149‑1 (MQ=255)
                                                                                               ggCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGAt                                                 >  6:14834/1‑148 (MQ=255)
                                                                                               ggCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGAt                                                 >  6:19342/1‑148 (MQ=255)
                                                                                                  gcTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGt                                             >  2:293054/1‑149 (MQ=255)
                                                                                                   cTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAg                                                                                                      <  7:279268/91‑1 (MQ=255)
                                                                                                   cTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAg                                                                                                      >  8:279268/1‑91 (MQ=255)
                                                                                                         agagCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACt                                      <  5:14834/149‑1 (MQ=255)
                                                                                                         agagCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACt                                      <  5:19342/149‑1 (MQ=255)
                                                                                                              tGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCt                                 >  2:239092/1‑149 (MQ=255)
                                                                                                                   gcgcgcCTGCGTGACCTGCTCGAGCCCTcgctgctggcacggatgaaagcaaggtgggtgaccggttgtttaagggtcattgcacaatctccttgaagcaggcggacggaaaagccaggctgccaaggttaggcgctcacccgcgcggc                            >  5:125617‑M2/1‑28 (MQ=255)
                                                                                                                   gcgcgcCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGcc                            <  1:239092/149‑1 (MQ=255)
                                                                                                                           gCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGAt                                                 <  6:74938/120‑1 (MQ=255)
                                                                                                                           gCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGAt                                                 >  5:74938/1‑120 (MQ=255)
                                                                                                                           gCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTg                     >  7:248509/1‑148 (MQ=255)
                                                                                                                            cGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCTGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGa                   <  8:202184/149‑1 (MQ=255)
                                                                                                                              tGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAgg                 <  5:18773/149‑1 (MQ=255)
                                                                                                                                  cTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGcc                            <  2:296680/134‑1 (MQ=255)
                                                                                                                                  cTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAGGTGtt             <  1:269758/149‑1 (MQ=255)
                                                                                                                                     cTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAGGTGTTc            <  4:11388/147‑1 (MQ=255)
                                                                                                                                        gAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAGGTGTTCGGTg        >  1:207692/1‑148 (MQ=255)
                                                                                                                                           cccTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAGGTGTTCGGTGAACt    >  3:319104/1‑149 (MQ=255)
                                                                                                                                             cTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGc                                  <  1:311912/117‑1 (MQ=255)
                                                                                                                                             cTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGc                                  >  2:311912/1‑117 (MQ=255)
                                                                                                                                             cTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAGGTGTTCGGTGAACTgg  <  8:132955/149‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
GCAGCCTGGCTTTTCCGTCCGCCTGCTTCAAGGAGATTGTGCAATGACCCTTAAACAACCGGTCACCCACCTTGCTTTCATCCGTGCCAGCAGCGGGCGCTCGGCAGAGCTGGGCGCGCGCCTGCGTGACCTGCTCGAGCCCTCGCTGCGTACACCGGGTTGCCTGAGTTTTACCGTGCAGCGTTCTCAGGCTGATGCTGACCTGTGGTTGCTCAGCGGAAGCTGGCAGGACCAGCAGGCGATGAGTGGTTACTTTGCTTCGCCGACACTGGAGGTGTTCGGTGAACTGG  >  NC_002947/1592053‑1592342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.