New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1804372 =	49 (0.940)	4 (0.080)	4/252	NT	8.6%	coding (725/948 nt)	accA	acetyl‑CoA carboxylase carboxyltransferase subunit alpha
	?	NC_002947	1804413 =	39 (0.790)					coding (766/948 nt)	accA	acetyl‑CoA carboxylase carboxyltransferase subunit alpha

GGCCATTGGCGTGTGCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGACAACGATGCGCTACTGGC  >  NC_002947/1804265‑1804558                                                                                                                                                     |                                                                                                                                                  agctgctgcaccagatcggcacggatgctttcggacatcttggccggatcacggtgggcgccgcccagcggctcctggatgaccttgtcgacaatgttcaggctcttCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGa                                                                                                                                                   >  5:248025‑M1/108‑149 (MQ=255)      ttGGCGTGTGCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGc                                                                                                                                              <  1:320947/149‑1 (MQ=255)              tgCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACAt                                                                                                                                      <  5:232820/149‑1 (MQ=255)                cGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTg                                                                                                                                    >  3:291017/1‑149 (MQ=255)                 gACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGt                                                                                                                                   <  6:329580/149‑1 (MQ=255)                  aCCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTc                                                                                                                                  <  1:327234/149‑1 (MQ=255)                    cAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGa                                                                                                                                <  6:222142/149‑1 (MQ=255)                       cTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGAc                                                                                                                               >  8:180941/1‑147 (MQ=255)                       cTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACaa                                                                                                                             <  2:87773/149‑1 (MQ=255)                              tgctgcAGTACTCCACCTACTCGGTGATCTCGCCTGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATc                                                                                                                      <  6:74140/149‑1 (MQ=255)                                 tgcAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAaga                                                                                                                                                >  4:170197/1‑120 (MQ=255)                                 tgcAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAaga                                                                                                                                                <  3:170197/120‑1 (MQ=255)                                        ttggccggatcacggtgggcgccgcccagcggctcctggatgaccttgtcgacaatgttcaggctcttCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAaga                                                                                                                                                <  5:307119‑M1/45‑1 (MQ=255)                                        ttggccggatcacggtgggcgccgcccagcggctcctggatgaccttgtcgacaatgttcaggctcttCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAaga                                                                                                                                                >  6:307119‑M1/69‑113 (MQ=255)                                         tCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCTGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCt                                                                                                           >  6:285334/1‑149 (MQ=255)                                          ccACCTACTCGGTGATCTCGCCGCAAGGCAGTGCTTCGATTCTGTGGAAAACTGCCGAAAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCAGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGCTCAACCAGGAGCCGCtc                                                                                                          >  8:251583/1‑148 (MQ=255)                                           cACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTg                                                                                                          <  7:180941/148‑1 (MQ=255)                                             ccTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGggc                                                                                                       <  6:125752/149‑1 (MQ=255)                                                    ggTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGcc                                                                                                 >  2:298492/1‑148 (MQ=255)                                                     gTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCCCCCa                                                                                               >  8:211056/1‑149 (MQ=255)                                                            cGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGAt                                                                                        >  3:147075/1‑149 (MQ=255)                                                               cGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGAATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCg                                                                                     <  3:7264/149‑1 (MQ=255)                                                                ggAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCgg                                                                                    <  4:291017/149‑1 (MQ=255)                                                                       tgtgCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCTTGATCCGGc                                                                                   >  5:81219/1‑143 (MQ=255)                                                                       agtgCATCCATTCTTTTGAAAACTTCCCATAAACCACCAGAAGCGGCCGAGGCCATGGGCATCACCGCCGACCGTCTGAATAGCCTGAACATTGTCGACAATGTCATCCATGAGCCGCTGTGCGGCGCCCACCGTGATCCGGc                                                                                   <  6:81219/142‑1 (MQ=255)                                                                           cTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTcc                                                                         <  2:229834/149‑1 (MQ=255)                                                                            ttCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTcc                                                                         >  4:315195/1‑148 (MQ=255)                                                                               gATTCTGTGTAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGaaa                                                                     <  7:211056/149‑1 (MQ=255)                                                                               gATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGa                                                                       >  1:318861/1‑147 (MQ=255)                                                                                aTTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAg                                                                    >  3:216776/1‑149 (MQ=255)                                                                                       ggAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGt                                                             >  2:174962/1‑149 (MQ=255)                                                                                        gAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTg                                                            >  4:140530/1‑149 (MQ=255)                                                                                         aaaaCTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGc                                                           <  7:251583/149‑1 (MQ=255)                                                                                             cTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGAt                                                       >  7:293760/1‑149 (MQ=255)                                                                                                cctaTAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTg                                                    <  8:121614/146‑1 (MQ=255)                                                                                                      aaGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTgcag                                              <  6:116761/149‑1 (MQ=255)                                                                                                        tcttcagacgctcggcggtgatgcccatggcctcggccgcgtctgAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCaa                                                                                <  5:307119‑M2/68‑1 (MQ=255)                                                                                                        tcttcagacgctcggcggtgatgcccatggcctcggccgcgtctgAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCaa                                                                                >  6:307119‑M2/46‑113 (MQ=255)                                                                                                           tcagacgctcggcggtgatgcccatggcctcggccgcgtctgAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCt                                         >  5:248025‑M2/43‑149 (MQ=255)                                                                                                            cagacgctcggcggtgatgcccatggcctcggccgcgtctgAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGGCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTg                                        >  1:103203‑M2/42‑149 (MQ=255)                                                                                                             AGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTgg                                       >  1:182178‑M1/1‑149 (MQ=255)                                                                                                              GACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGa                                      <  5:279897‑M1/149‑1 (MQ=255)                                                                                                                        aGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGaaa                                                                     >  2:279298/1‑108 (MQ=255)                                                                                                                        aGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGaaa                                                                     <  1:279298/108‑1 (MQ=255)                                                                                                                          gCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGc                            >  3:254203/1‑147 (MQ=255)                                                                                                                          gCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGc                            >  2:4996/1‑147 (MQ=255)                                                                                                                           ccATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAg                         <  2:318861/149‑1 (MQ=255)                                                                                                                                ggCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGa                    <  4:216776/149‑1 (MQ=255)                                                                                                                                ggCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGa                    <  1:4996/149‑1 (MQ=255)                                                                                                                                        cgccgAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGACAACGATg            >  8:276330/1‑149 (MQ=255)                                                                                                                                          ccgAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGACAACGATgcg          >  7:100735/1‑149 (MQ=255)                                                                                                                                           cgAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGACAACGATgcgc         <  5:285334/149‑1 (MQ=255)                                                                                                                                            gAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGACAACGATGCGCt        <  3:315195/149‑1 (MQ=255)                                                                                                                                                     aaGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGACAACGATGCGCTACTGGc  <  8:100735/146‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGCCATTGGCGTGTGCGACCAACTGAACATGCTGCAGTACTCCACCTACTCGGTGATCTCGCCGGAAGGCTGTGCTTCGATTCTGTGGAAAACTGCCGATAAAGCAGCAGACGCGGCCGAGGCCATGGGCATCACCGCCGAGCGTCTGAAGAGCCTGAACATTGTCGACAAGGTCATCCAGGAGCCGCTGGGCGGCGCCCACCGTGATCCGGCCAAGATGTCCGAAAGCATCCGTGCCGATCTGGTGCAGCAGCTGGACATGCTCGGCAAGTTCGACAACGATGCGCTACTGGC  >  NC_002947/1804265‑1804558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.