New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1910479	49 (0.940)	3 (0.060)	3/250	NT	6.1%	coding (333/1341 nt)	PP_1710	phthalate permease family MFS transporter
	?	NC_002947	= 1910564	47 (0.960)					coding (248/1341 nt)	PP_1710	phthalate permease family MFS transporter

ATGGCGCCGACCGCCAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACGTAGTTGATGATGGTCGCCACCAGCAG  >  NC_002947/1910420‑1910709                                                                                                                                                 |                                                                                                                                                  aTGGCGCCGACCGCCAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTAccag                                                                                                                                               >  6:107708‑M2/1‑145 (MQ=255)  tGGCGCCGACCGCCAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTAccagg                                                                                                                                              >  1:326210‑M2/1‑144 (MQ=255)         gACCGCCAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAAcg                                                                                                                                       >  3:198517/1‑149 (MQ=255)         gACCGCCAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAAcg                                                                                                                                       >  8:237908/1‑149 (MQ=255)            cGCCAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGt                                                                                                                                    <  4:198517/149‑1 (MQ=255)              ccAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAg                                                                                                                                  >  3:84466/1‑149 (MQ=255)               cAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAgg                                                                                                                                 >  3:240112/1‑149 (MQ=255)                  gcgcAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTc                                                                                                                               >  7:120802/1‑148 (MQ=255)                               aGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGga                                                                                                                 <  4:258128/149‑1 (MQ=255)                                 tGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGgag                                                                                                                >  2:28040/1‑148 (MQ=255)                                   aGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGaaa                                                                                                             <  4:240034/149‑1 (MQ=255)                                   aGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGaa                                                                                                              <  4:244621/148‑1 (MQ=255)                                     gCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAAt                                                                                                           >  2:15970/1‑149 (MQ=255)                                      cGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATc                                                                                                          <  5:104743/149‑1 (MQ=255)                                       gAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAAt                                                                                                           >  4:74194/1‑147 (MQ=255)                                       gAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCa                                                                                                         <  8:77397/149‑1 (MQ=255)                                         aGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAgg                                                                                                       <  4:141046/149‑1 (MQ=255)                                                 gCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCAtctc                                                                                               >  8:91009/1‑149 (MQ=255)                                                     ggCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTAccagggcctggccagcggcttcgcctcactgttcggcctgcgcctggcggtcggcg                                                                                           <  4:18577‑M2/149‑57 (MQ=255)                                                     ggCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGAcc                                                                                           <  7:91009/149‑1 (MQ=255)                                                        ccTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTg                                                                                        >  3:125223/1‑149 (MQ=255)                                                            ggCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTc                                                                                      <  8:120802/147‑1 (MQ=255)                                                              ccACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTAccagg                                                                                                                                              <  2:208933‑M2/89‑6 (MQ=255)                                                              ccACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCtt                                                                                         >  7:212565/1‑142 (MQ=255)                                                              ccACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCtt                                                                                         <  8:212565/142‑1 (MQ=255)                                                                  ggTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCa                                                                              <  4:84466/149‑1 (MQ=255)                                                                        cgccgACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCtt                                                                        >  3:135044/1‑149 (MQ=255)                                                                           cgACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTgg                                                                     <  4:240112/149‑1 (MQ=255)                                                                            gACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGc                                                                    <  7:237908/149‑1 (MQ=255)                                                                                 gCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATg                                                                >  5:24312/1‑148 (MQ=255)                                                                                 gCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATg                                                                >  8:258033/1‑148 (MQ=255)                                                                                     aTCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTAGTCCAGGCCCAGGTCTTTGGCCATGAACgg                                                           <  1:28040/149‑1 (MQ=255)                                                                                        aGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTAccagggcctggccagcggcttcgcctcactgttcggcctgcgcctggcggtcggcgccatggaggccccggccttcccggccaacagccgt                                                        >  3:18577‑M2/1‑58 (MQ=255)                                                                                         gCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAAc                                                             <  4:256990/143‑1 (MQ=255)                                                                                         gCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAAc                                                             >  3:256990/1‑143 (MQ=255)                                                                                         gCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCt                                                       <  3:180633/149‑1 (MQ=255)                                                                                            acacGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCg                                                    <  7:138449/149‑1 (MQ=255)                                                                                              acGCCATAGGTCAGACGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGAt                                                  <  3:127372/149‑1 (MQ=255)                                                                                                gCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGTGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATg                                                 >  8:26916/1‑148 (MQ=255)                                                                                                    tAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAAt                                            <  1:15970/149‑1 (MQ=255)                                                                                                       gTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACGTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGtt                                         >  1:82383/1‑149 (MQ=255)                                                                                                          aGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGa                                                   >  8:7432/1‑136 (MQ=255)                                                                                                          aGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGa                                                   <  7:7432/136‑1 (MQ=255)                                                                                                           ggCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTAccagggcctggccagcggctttgcctcactgttcggcctgcgcctggcggtcggcgccatggaggccccggccttcccggccaacagccgtgcggttacggtatggttcc                                     >  1:262658‑M2/1‑39 (MQ=255)                                                                                                              gTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAACGTTCACCCgg                                  >  6:281682/1‑149 (MQ=255)                                                                                                                    cGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACg                            >  6:24321/1‑149 (MQ=255)                                                                                                                    cGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACg                            >  2:300987/1‑149 (MQ=255)                                                                                                                      aaGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAAt                                            <  1:279882/131‑1 (MQ=255)                                                                                                                      aaGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAAt                                            >  2:279882/1‑131 (MQ=255)                                                                                                                                cAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCCGTCGACGTAGTTGatgatg                >  1:223177/1‑149 (MQ=255)                                                                                                                                   tGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCATGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGTCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACGTAGTTGATGATGGTc             <  7:258033/149‑1 (MQ=255)                                                                                                                                      agccagccGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACGTAGTTGATGATGGTCGc           <  2:82383/148‑1 (MQ=255)                                                                                                                                      agccagccGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAACGTTCACCCGGTCGACGTAGTTGATGATGGTCGcc          <  5:281682/149‑1 (MQ=255)                                                                                                                                        ccagccGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACGTAGTTGATGATGGTCGccac        >  8:111949/1‑149 (MQ=255)                                                                                                                                           gccGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACGTAGTTGATGATGGTCGCCACcag     <  5:24321/149‑1 (MQ=255)                                                                                                                                               gTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACGTAGTTGATGATGGTCGCCACcagcag  >  6:77386/1‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                  ATGGCGCCGACCGCCAGGCGCAGGCCGAACAGTGAGGCGAAGCCGCTGGCCAGGCCCTGGGCCACGGTGACCGCCGACCAGCTGATCAGCGACACGCCATAGGTCAGGCGTGAGCCGAAGCGGTCGGCAATGAAGCCAGCCGGTACCAGGGCCAACGCGTAGGTCCAGGCGAATGCGGAGAAAATCAGGCCCATCTCGACCTTGTCCAGGCCCAGGTCTTTGGCCATGAACGGCGCTGCGATGGAAATGTTCACCCGGTCGACGTAGTTGATGATGGTCGCCACCAGCAG  >  NC_002947/1910420‑1910709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.